Gene Mbar_A1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1628 
Symbol 
ID3627327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2009643 
End bp2010194 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content47% 
IMG OID637700509 
Productphenylacrylic acid decarboxylase 
Protein accessionYP_305153 
Protein GI73669138 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.669266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATAA CGGTAGGAAT CAGCGGAGCC TCAGGGGTCC AGTATGGAAT TCGCCTTCTT 
GAAGTACTGG CAGAAAAAGG AATTAAAACT CATCTGGTTT TGACGGATGC CGCAAAACAG
ATAATCGAAA TTGAAACCGA TTATAGTCCC GAGACAGTGG AAAAACTCGC AACATGGAGC
TATGCCCAGA AAGATTTTTC AGCACCAATA GCCAGTGGTT CCTACAGGAC AGGAGGAATG
GTTATCGCTC CGTGCAGCAT GAAAACTCTT GCAGCCGTGG CAAACGGAGT ATCCGATACC
CTTCTTACAA GAGCCGCAGA TGTCTGCCTC AAAGAGGAGA GGAAACTTAT TCTGATGACC
CGGGAAACCC CGCTTAACCT TATACACATC GAAAACATGC TCAGGGCTAA AAAAGCAGGG
GCAAGCATCC TTCCAGCCTG CCCGGGATTT TATTCGAGAC CCAAAACTCT TGAAGGCCTT
ATAGATATCA TGGTGGGAAG AACTCTTGAC CTGCTGGGGA TAGATAACGA GATTTATCGA
CGCTGGAAGT AA
 
Protein sequence
MEITVGISGA SGVQYGIRLL EVLAEKGIKT HLVLTDAAKQ IIEIETDYSP ETVEKLATWS 
YAQKDFSAPI ASGSYRTGGM VIAPCSMKTL AAVANGVSDT LLTRAADVCL KEERKLILMT
RETPLNLIHI ENMLRAKKAG ASILPACPGF YSRPKTLEGL IDIMVGRTLD LLGIDNEIYR
RWK