Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1626 |
Symbol | |
ID | 3627324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2002090 |
End bp | 2004024 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637700506 |
Product | hypothetical protein |
Protein accession | YP_305151 |
Protein GI | 73669136 |
COG category | [R] General function prediction only |
COG ID | [COG3291] FOG: PKD repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAAAAA AAATTCTGAA ACCGTTAAGA AAAACTGTTT CTGAACTGTT ATGTGTCATA TGTACATCAT TATTATTAAT ATCTCTATTT TCATTTACCG CCTTGGCTGG AGATATAAAC ACGTCCCCCA ATATAAACTC AGACGATAAG ATCTCAGCAA GTGTAGTTTC TAAACTTACT GAAATTTCAG GAGATGAACA AATTCCAGTG ATTATAACGC TACCAAATCA AAAGATTGCG TTTAATACTG CTGCTGGAAA ATATCAAATT GAGAGCGAAC AGAAAAATCT CATAAAGTTT CTTGAGAATG AAAAATCAAA AAACAAAGTA AATAAAATAA AACCTATCAA AATTATCAAT GCTGTTGCCG CCAAGGTAAA CCCTGAAGTT TTAGCTTCTC TTGCCGGAAG ATCTGACGTT TCGAAGATTG AACTTGACGA AGTCGTCTCT ATAGTAGGGC AATCAGAACC TTCTTTCAAG AAAATAGCAG CATCGACTAC CCTGTCAACT GCGGCATCCA CAAATGCATG GGGAGTGGAT AAGATTGACG CGCCTGCAGT ATGGCAGCAA GGTATAAACG GTAAAGGAAT AACTGTTGCT GTCGTGGATA CAGGAATTGA TGCAACACAC CCCGATCTTG ACGATCTTGA TGACAATCCC AGTACAAATG ATCCTAAAGT TGTAGGCTGG GTTGACTATA TAAACTCGCA GTCGTCTGCT TATGACGATA ACGGGCACGG TACCCATGTA GCCGGAATCG TTTCAGGAAC CGGAGATAAT GGGATACAAA CAGGAGTTGC ACCAGGTACA AAGCTGCTTG TAGCAAAAGT ATTCGATTCA GAAGGTGATG GATATTTATC CACCTGTATT CTTGGTTTTG AATGGGCAGT TAATAATAAT GCCCGTATTA TAAGTTTTAG CGGCGGATCT CCAGAACATG ATTCGTTATT TACAACCATG ATAAACAAGG TAGTGGCGGC AGGTGTAGTT CCTGTTATAG CGGCCGGCAA TGATGGTGAT GGATCTGGCA CAATCACATG CCCGGGTGAT GAACTCAATT CACTCACTGT CGGTGCAACG GATTCCTCCG ATGCAATAGC AGACTTTAGC AGCCGAGGTC CTGTCACTCT AGATGATCAG ACATACATTA AACCCGATAT CTCTGCGCCT GGTGTGTCTA TTCCTTCAAC ATATCCAGGA GACGGATACG CATATGGGGA TGGAACTTCC ATGGCAGCGC CACACGTTTC CGGTACTGTA GCATTAATTC TGGAAAAGAA ACCGACTATG ACGCCGGCTG AAGTAAAGAA GGAATTAGAA AGTACAGCAG TAGATCTTGG ATCGGCAGGA AAGGATAATG ATTACGGTTC AGGCCGGATC GATGCATATG ATGCAGTATT CGGCAAAGGA CCTGTTGCAA ACTTTTATGC AAAACCGACC TCTGGAAAAG TCCCATTAAC AGTTGCCTTT ACTGACACCA GCACAGGAAC GCCGACTAAA TGGAGATGGA ATTTTGGAGA TGGATCAAAG TCATTCCTCC AGAATCCAAA GCATAAATAT TCAAAGGCAG GAACATATAC TGTTAACTTG ACAGTAAAGA ATGCTAAAGG CAAGAACACG GTAACAAAAA CAGATTACAT AGTAGTAATC TCAAAACCTA CTGCTGCATT CTCTGCATCT CCTACCTCAG GAAAAGCCCC ATTAACTGTT GCCTTTACTG ATAAGAGTTC AGGAAACCCC ACTGCATGGA AATGGAGCTT TGGAGACGGA ACAATTTCAA GAGAAAAGAA TCCAACGCAT CAGTATTTAC AGGAAGGAAA ATATAAGATT ACACTTACAG TAAGCAATGC TGCAGGCAAA AGTACTACAA AGAAGATAAA CTACATAAAA GTGACAACAA ATACAAGACC AGGAATATAC TCTGAAAGTA AATAA
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Protein sequence | MEKKILKPLR KTVSELLCVI CTSLLLISLF SFTALAGDIN TSPNINSDDK ISASVVSKLT EISGDEQIPV IITLPNQKIA FNTAAGKYQI ESEQKNLIKF LENEKSKNKV NKIKPIKIIN AVAAKVNPEV LASLAGRSDV SKIELDEVVS IVGQSEPSFK KIAASTTLST AASTNAWGVD KIDAPAVWQQ GINGKGITVA VVDTGIDATH PDLDDLDDNP STNDPKVVGW VDYINSQSSA YDDNGHGTHV AGIVSGTGDN GIQTGVAPGT KLLVAKVFDS EGDGYLSTCI LGFEWAVNNN ARIISFSGGS PEHDSLFTTM INKVVAAGVV PVIAAGNDGD GSGTITCPGD ELNSLTVGAT DSSDAIADFS SRGPVTLDDQ TYIKPDISAP GVSIPSTYPG DGYAYGDGTS MAAPHVSGTV ALILEKKPTM TPAEVKKELE STAVDLGSAG KDNDYGSGRI DAYDAVFGKG PVANFYAKPT SGKVPLTVAF TDTSTGTPTK WRWNFGDGSK SFLQNPKHKY SKAGTYTVNL TVKNAKGKNT VTKTDYIVVI SKPTAAFSAS PTSGKAPLTV AFTDKSSGNP TAWKWSFGDG TISREKNPTH QYLQEGKYKI TLTVSNAAGK STTKKINYIK VTTNTRPGIY SESK
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