Gene Mbar_A1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1608 
Symbol 
ID3624233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1979973 
End bp1980551 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content35% 
IMG OID637700489 
Producthypothetical protein 
Protein accessionYP_305134 
Protein GI73669119 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.556372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGG AATTTAGTAA CTCTAGTGTG AGACAAAAGA AGTTCCTTTT TCTCATCTGG 
TTGCTTGTGA TTATAGGAGG AATGACATTA TATCTCATTT TTCCGGATGA AATTAACCTT
CTCTTCCTTA AAGAACTTGC AAAAGAACAT CATATTGTTG TTCTTGGAAT CTATTTTCTT
TTATTATCTT TTAGAGGGCT GACAATGATT CCTTCAACTG CTCTTCTGTT TTCAGGAATT
ATCATCTTTA ATCCAGTAGA GCTTTTTATA GTAAACATGT TAGGAATACT TGCCTCGTCC
ACAATCGTGT ACTATTTTTC AAAGTATATG GGCTTCGCTA CATATTTTGA AACAAAGTAC
GGAAAATATA TTCAAAAAAT AAGACATGGC CTTGGAGACA ATGAACTTCC AATTATAGTG
GGCTGGAGCT TTTTTCCTTT TGTCCCAACA GACTTAATAG TTTATGTTGG CTCTACCTTG
GGAGTACACA TATTTAAGTG CCTGATGGGA GTTTTCATAG GAGAAGCAAC ACTAAATGTA
TTGTACATCC TCTCGGCATA TATGATTTTA CGCCTTTAG
 
Protein sequence
MEKEFSNSSV RQKKFLFLIW LLVIIGGMTL YLIFPDEINL LFLKELAKEH HIVVLGIYFL 
LLSFRGLTMI PSTALLFSGI IIFNPVELFI VNMLGILASS TIVYYFSKYM GFATYFETKY
GKYIQKIRHG LGDNELPIIV GWSFFPFVPT DLIVYVGSTL GVHIFKCLMG VFIGEATLNV
LYILSAYMIL RL