Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1608 |
Symbol | |
ID | 3624233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1979973 |
End bp | 1980551 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637700489 |
Product | hypothetical protein |
Protein accession | YP_305134 |
Protein GI | 73669119 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.556372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAGG AATTTAGTAA CTCTAGTGTG AGACAAAAGA AGTTCCTTTT TCTCATCTGG TTGCTTGTGA TTATAGGAGG AATGACATTA TATCTCATTT TTCCGGATGA AATTAACCTT CTCTTCCTTA AAGAACTTGC AAAAGAACAT CATATTGTTG TTCTTGGAAT CTATTTTCTT TTATTATCTT TTAGAGGGCT GACAATGATT CCTTCAACTG CTCTTCTGTT TTCAGGAATT ATCATCTTTA ATCCAGTAGA GCTTTTTATA GTAAACATGT TAGGAATACT TGCCTCGTCC ACAATCGTGT ACTATTTTTC AAAGTATATG GGCTTCGCTA CATATTTTGA AACAAAGTAC GGAAAATATA TTCAAAAAAT AAGACATGGC CTTGGAGACA ATGAACTTCC AATTATAGTG GGCTGGAGCT TTTTTCCTTT TGTCCCAACA GACTTAATAG TTTATGTTGG CTCTACCTTG GGAGTACACA TATTTAAGTG CCTGATGGGA GTTTTCATAG GAGAAGCAAC ACTAAATGTA TTGTACATCC TCTCGGCATA TATGATTTTA CGCCTTTAG
|
Protein sequence | MEKEFSNSSV RQKKFLFLIW LLVIIGGMTL YLIFPDEINL LFLKELAKEH HIVVLGIYFL LLSFRGLTMI PSTALLFSGI IIFNPVELFI VNMLGILASS TIVYYFSKYM GFATYFETKY GKYIQKIRHG LGDNELPIIV GWSFFPFVPT DLIVYVGSTL GVHIFKCLMG VFIGEATLNV LYILSAYMIL RL
|
| |