| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1575 |
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| Symbol | |
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| ID | 3625351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1938410 |
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| End bp | 1940803 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637700457 |
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| Product | hypothetical protein |
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| Protein accession | YP_305102 |
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| Protein GI | 73669087 |
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| COG category | [K] Transcription |
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| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.842074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGG ATATGTCAAG CGCCGACGTT GCTGCAGTTG TTGCCGAGCT GTCAGCAGGT
CCAAAATCCA TAATTGATGC GAAGATCGGG AAGATCTATC AGCCCGCAAA CGAGGAAATT
CGCATCAATC TTTACGTTTT TCACCAGGGC AGGGACAACC TGGTTATTGA GGCCGGGAAG
CGCATTCATC TTAGCAAATA CCTCAGGGCA AGCCCGACGC TTCCCCAGGC TTTTCCGATG
CTGCTTAGAA AATACCTGAT GGGAGGCAGG ATTGTATCTG TTGAGCAGCA CGACTTTGAC
AGGATCGTGA AAATTGGAAT TGAGAGAGCT GGAGTCCACA GTAATCTTAT TGTGGAGCTT
TTCGCCCCTG GGAACATACT TATTGTCGAT TCGGAAAACA GGATTATTCT GCCTATGAAT
CCTGTAACAA TGAAGGATAG GCGGCTTAGG AGTGGAGAAA TTTACGAACT GCCTGAGGCA
CAGATAAGTC CTCTCAAGGT AAAGGATTCT GACCTTATGA AGGAGTTTTC CAGGTCAACC
TCTGATATCG TCAGGACGGT TGCCACAAGG TTCAATCTGG GTGGAGTTTT GGCAGAAGAA
GTCTGTGCCA GGGCAGGAAT TGACAAATCA AAGCCTTCAA AGGAAGCAAC TGAAGAAGAC
GCCTCCATGA TCTGCAATGC AATGCACGAT CTCTTTTCTC CGCTTTTGAT GACAGGAGCC
GGAGAGAAAG GTCTCACAGA AGCCGAAATC GAGACTGAAC CTAAATCCGA TATCGAGTCT
AAGCCAAAAA CCGAGATTAA ACCCGAAACC GAGATTAAAC CCGAAACCAA AATTAAACCC
GAAGTTGGGG TTGAAGGCGA GGCTCCTAAT CTCAGGCCTC AGCATGTGAA AAAGGAAATC
AAAGGAAAGC TGGAAACTTT TGATGTACTT CCTTTTGATC TTACTCGCTA TTCCGGATTT
GAAAAAGAGT ATTTTGATTC TTTTAACACG GCACTTGATG AATTTTTTGG GAAAAAGGCA
CTTGAACAGA TCGAAGAGGT AAAAGCAGCT AAGAAAAAGG AGAAAACACT TGGCGTTTAT
GAACGGCGGC TTCTTCAACA GGAAGGGAGT CTTAAAAAGT TTGAAAAAGA AATCGAGAAA
AATAATACCC TTGCTGAGAC AGTCTATGCA AACTACCAGG GTATCGAAGA GCTCCTTTCC
GTGCTCAATG GAGCAAGGTC AACGGGATAT TCCTGGGACG AGATCCGCTC CATTCTGAAG
CAGGCTAAAA AGACCGTGCC TGCCGCGCAG AAAATCACAA ATATTGACCC AAGGACAGGG
ACTGTAACTG TGAATTTTGA CGGAAAGAGT ATTAGTCTTG ACATCCGCAA AACAGTGCCA
CAGAATGCTC AGGAATACTA TGAAAAGGTC AAGAAATTTA ACAAGAAAAA AGACGGAGCT
CTCAAAGCTA TCGAAGATAC CAGGAAGGCT ATGGAGAAAA AGGCCGTGGC AAAGGTTGCA
AAGGCAGGAA GAAAGCTCCG GGCGTCCAGG AAAAAACACT GGTATGACAG GTTCAGGTGG
TTCGTGTCCT CAGACGGCTT TTTTATTGTG GGAGGTAGGG ATGCAGACAC CAATGAGGAG
ATATTTAAGA AATACCTGGA AAAGAGAGAC CTTGTCTTCC ATACTCAAAC ACCAGGGGCT
CCTCTCACAG TTATCAAGAC CGGCGGAGAA GAGGTTCCTG AATCTACTTT GCAGGAAGCG
GCACAGTTTG CTGTTTCTTA TTCCAGTCTC TGGAAAGCAG GGCATTTCAG TGGGGACTGC
TACTGGGTTA AAGCCGAGCA GGTCAGCAAA ACTCCAGAAT CAGGAGAATA TGTGAAAAAA
GGAGCTTTTA TCATCCGTGG GGAACGCAAT TACTTTAAGG ATATTCCTCT CGGCGTTGCA
GTTGGGCTTG AACTCAAAGG CGAGACAAGG GTTATAGGTG GGCCTGTTTC TGCTGTCCGG
AAACATGGGG ATTATATCCT CGAAGTCGTC CCCGGGGCTT TTAACCAGAA TGATATCTCT
AAAAAGATCT ACAGGATTTA TGCCGACGAA CTCAACGATC CCCGCTTCGT AAAGCAGATT
GCTTCTCCTG ACCAGATCGC TATGATGGTC CCACCCGGAG AATCGGACTT AAAGAGTCAG
AAGCCGAAAA GGAAGGGAGA AAAGATCAAG GGTGAGGGCG AGGAACATGA GTCTCAGGAA
GTTGAGACAG AACTTGAAGA TAACGGGGAC GAAATTGAAA AGGAATTCGA AAAAAACTTC
GGAAAGGGAA CTAAAGAGGA ATTCGAGGAA AAACTCGCTG GAAAAATCCC AGAAAATAAA
ACCGGGGATG GAAAGGAAGA GAAAATGGAA CTTCATGGAG GTAAAAAGGC ATGA
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| Protein sequence | MKQDMSSADV AAVVAELSAG PKSIIDAKIG KIYQPANEEI RINLYVFHQG RDNLVIEAGK
RIHLSKYLRA SPTLPQAFPM LLRKYLMGGR IVSVEQHDFD RIVKIGIERA GVHSNLIVEL
FAPGNILIVD SENRIILPMN PVTMKDRRLR SGEIYELPEA QISPLKVKDS DLMKEFSRST
SDIVRTVATR FNLGGVLAEE VCARAGIDKS KPSKEATEED ASMICNAMHD LFSPLLMTGA
GEKGLTEAEI ETEPKSDIES KPKTEIKPET EIKPETKIKP EVGVEGEAPN LRPQHVKKEI
KGKLETFDVL PFDLTRYSGF EKEYFDSFNT ALDEFFGKKA LEQIEEVKAA KKKEKTLGVY
ERRLLQQEGS LKKFEKEIEK NNTLAETVYA NYQGIEELLS VLNGARSTGY SWDEIRSILK
QAKKTVPAAQ KITNIDPRTG TVTVNFDGKS ISLDIRKTVP QNAQEYYEKV KKFNKKKDGA
LKAIEDTRKA MEKKAVAKVA KAGRKLRASR KKHWYDRFRW FVSSDGFFIV GGRDADTNEE
IFKKYLEKRD LVFHTQTPGA PLTVIKTGGE EVPESTLQEA AQFAVSYSSL WKAGHFSGDC
YWVKAEQVSK TPESGEYVKK GAFIIRGERN YFKDIPLGVA VGLELKGETR VIGGPVSAVR
KHGDYILEVV PGAFNQNDIS KKIYRIYADE LNDPRFVKQI ASPDQIAMMV PPGESDLKSQ
KPKRKGEKIK GEGEEHESQE VETELEDNGD EIEKEFEKNF GKGTKEEFEE KLAGKIPENK
TGDGKEEKME LHGGKKA
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