Gene Mbar_A1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1570 
Symbol 
ID3625346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1931905 
End bp1932627 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content42% 
IMG OID637700452 
Producthypothetical protein 
Protein accessionYP_305097 
Protein GI73669082 
COG category[S] Function unknown 
COG ID[COG1711] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATAG AAGAAATCAG CCAGGTCCTG TATAAGGAAA AAAACCAGAC AATAAAGACA 
ATTCCAGCTG ATTTTTACCT GGAGGCTGAG AAATATGTCC GGAAACTCGA AGAAGAGATT
GAGAAAATCG GCAATTCCCG TTCTCCGGAG TTCAAAATGC TTCAAGACGA ACATGAAAGA
GCACTTTCGG ACCTTGAAAC TATATTCATG AAACGGATAG GAAAAGCTAT AACCAGGGCA
ACAACTCAGT CTAATGCGAA TAAACCTATT TCAAAAGACA TCGAAAAATT ACTTCCTGTA
GAAAAGAGGC TTTATGATCT TGTACTGCAA GGAATTAAAG CCGCAAAAAT CGAACTTTTA
GATCCTATTC TGTACCCTGG TTCCGAGAAT ACTGCAGTCT GGCCTGAAAT CGTGGAAAGA
CAAATCCATG CCGGTTTCAA TGAAGAAACG AAAGCAAAAA TGAGGATTCC CGTTATTGCA
GCCAGCGGGG AAACAGGAGC AGCCCCAGAC AAAAACAATA TAAATGATGA ATACGTTGTT
GTCCGAATAC TGAAAGATCT GCCGACCTTC ACAGGTGCAG ACGGCAGAAA TTATACGGTC
AGCGCTGAAG AAGTCGTTGT TTTGCCACAG CTCAATGCTA CAGGGCTGAT AAAGCGAAAC
GCAGCTAAAC TGATTGTCGG ACAGGAAGAC TCGGGAAAAG ACTCATTTCC TGGAAAAAAT
TAA
 
Protein sequence
MDIEEISQVL YKEKNQTIKT IPADFYLEAE KYVRKLEEEI EKIGNSRSPE FKMLQDEHER 
ALSDLETIFM KRIGKAITRA TTQSNANKPI SKDIEKLLPV EKRLYDLVLQ GIKAAKIELL
DPILYPGSEN TAVWPEIVER QIHAGFNEET KAKMRIPVIA ASGETGAAPD KNNINDEYVV
VRILKDLPTF TGADGRNYTV SAEEVVVLPQ LNATGLIKRN AAKLIVGQED SGKDSFPGKN