Gene Mbar_A1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1569 
Symbolrpl44e 
ID3625345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1931066 
End bp1931344 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content46% 
IMG OID637700451 
Product50S ribosomal protein L44e 
Protein accessionYP_305096 
Protein GI73669081 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1631] Ribosomal protein L44E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC CAAAGAAGTT CAGGAGTTAC TGCCCTTACT GTAAAACTCA TCAGGAAATA 
GTGGTTGAAA GGGTCAGGAA AGGTCAGGCT TCATCCATGA CTCGCATTGC AAGACAGAAG
AATAGACAGC AAGGCATAGG AAACAGTGGG AAATTCTCCA AGGTGCCCGG CGGCGACAAG
CCCACAAAAC GCATCTGGCT TAGATACCGC TGCACAGTAT GTAAGAAAGC CTACCAGAAA
CCATGTTTCA GGGCAAAGAA GTTTGAGTTC AAGGAGTAA
 
Protein sequence
MKIPKKFRSY CPYCKTHQEI VVERVRKGQA SSMTRIARQK NRQQGIGNSG KFSKVPGGDK 
PTKRIWLRYR CTVCKKAYQK PCFRAKKFEF KE