Gene Mbar_A1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1566 
Symbol 
ID3625342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1929829 
End bp1929984 
Gene Length156 bp 
Protein Length51 aa 
Translation table11 
GC content46% 
IMG OID637700448 
ProductH/ACA RNA-protein complex component Nop10p 
Protein accessionYP_305093 
Protein GI73669078 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2260] Predicted Zn-ribbon RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGACAAA AGATCCGCAA ATGTAAAAAT TGCGGCAGGT ACACTTTAAG GGAAATTTGT 
CCGGTCTGTG GGGGTAAACC TTTTTCCCCA AATCCGGCTC GCTTTTCTCC TAAGGACCCT
TATGGCAGGT ACCGCAGAAT GGCAAAGAAA GGATAA
 
Protein sequence
MGQKIRKCKN CGRYTLREIC PVCGGKPFSP NPARFSPKDP YGRYRRMAKK G