| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1553 |
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| Symbol | |
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| ID | 3625970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1913615 |
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| End bp | 1915207 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637700434 |
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| Product | nitrogenase, subunit D |
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| Protein accession | YP_305080 |
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| Protein GI | 73669065 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01284] nitrogenase alpha chain
[TIGR01861] nitrogenase iron-iron protein, alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATATC ACACGTTTAA GTGCAGCGAA TGTATTCCTG AAAGGGCTAT GCATGCTGTT
ATAAAAGGTC CAGGTGAAGA TTTGACGTCC TGCCTTCCCC TTGGATATCT CAACACGATC
CCTGGGACGA TTTCAGAACG TGGATGCGCT TTCTGCGGTG CAAAACATGT TATAGGTGCA
CCTATGAAAG ATGTCATCCA TCTGTGCCAT GGCCCAGTTG GATGTACCTA TGATACCTGG
CATACTAAGC GTTATATTAG CGATAACGAC AACTTCCAGC TTAAATATGC CTGGACGACA
GATATGAAGG AAAAGAACGT CGTATTCGGC GCTGAAAAAC TGCTCAAACA AAATATTATT
GATTGTTTCA AGGCATTTCC GCATATCAAA AGAATGAGTA TCTACCAAAC TTGCGCTTCA
GCACTTATTG GAGACGATAT AAATGCAGTT GCGAAAAAAG TGATGGAAGA AATGCCAGAT
GTTGATATCT TTGTCTGCAA TGCTCCTGGT TTTGGGGGAC CTAGCCAGTC GGGAGGACAT
CACAAAATCA ATATTGCTTG GGTCGATCAA AAAGTAGGAA CATTTGAACC TGAAATCAAA
AGCAAATACG TCATCAATTA TGTTGGTGAT TATAATATCC AGGGAGATGC GGAAATTATA
GTGGATTATT TCCAGAGAAT GGGGATTCAG GTTCTTTCCA CCTTTACTGG GAACGGATCC
TATGACGACC TTAGGGGTAT GCATCTGGCC CATCTCAATG TACTAGAATG TGCGCGTTCT
GCAGAATACA TCTGTAACGA ACTAAGAAAA AGATACGGAA CTCCACGTCT TGATATCGAT
GGATATGGTT TTGAACCGCT CTCAGCATCA CTAATGAAAG TGGCTATGTT TTTCGGAATT
GAAAAAGAAG CCCAGGATAT TATAGACGAA GAAATTGCTA GATGGAAACC GGAACTTGAC
TGGTATGCTA AACGTCTGAA AGGAAAAAGA ATTTGTCTCT GGCCTGGCGG CTCCAAACTC
TGGCATTGGG CACATGTAAT TGAAGAAGAA ATGGGAGTTA AAGTTGTCTC AGTGTATTCA
AAATTCGGTC ATCAGGGAGA CTTCGAAAAA GGCGTTGCTC GGTGCAGTGA AGGAGCACTT
GCTATTGATG ATCCTAATGA ACTTGAAGGG ATTGAAGCTA TGGAGATATT AAAACCCGAT
TGTGTCCTTA CAGGTGTCCG TCCGGGAGAG GTTTCCAAAA AGATGAGGAT CCAATATCTC
AATATTCATG GATATCACAA CGGTCCATAT AAAGGGTTTG AAGGATGGGT CAGGCTTGCA
AGGGATCTCT ACAATGCCAT CTATTCACCG ATTCATCAGC TTTCTGGTTT GAATATCAGT
AAGGATGAGA TCCCCACTGA TAAAGGATTC GTGACTAGGA AGATGATTTC TGATGTGAAT
ATCATTGAGG ATGGGAAAAC TCCAATCGAG GAAAGGCCAT ACACCGGTGA ATGTGATATT
GTTACAAGAC TACGCGGAAA AAAATATCCC AAGCTTGAAC CACAGCAGCC GCTTGGCATG
GTAATGGAAG GAGGTGAGGC CATTAATGGA TGA
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| Protein sequence | MPYHTFKCSE CIPERAMHAV IKGPGEDLTS CLPLGYLNTI PGTISERGCA FCGAKHVIGA
PMKDVIHLCH GPVGCTYDTW HTKRYISDND NFQLKYAWTT DMKEKNVVFG AEKLLKQNII
DCFKAFPHIK RMSIYQTCAS ALIGDDINAV AKKVMEEMPD VDIFVCNAPG FGGPSQSGGH
HKINIAWVDQ KVGTFEPEIK SKYVINYVGD YNIQGDAEII VDYFQRMGIQ VLSTFTGNGS
YDDLRGMHLA HLNVLECARS AEYICNELRK RYGTPRLDID GYGFEPLSAS LMKVAMFFGI
EKEAQDIIDE EIARWKPELD WYAKRLKGKR ICLWPGGSKL WHWAHVIEEE MGVKVVSVYS
KFGHQGDFEK GVARCSEGAL AIDDPNELEG IEAMEILKPD CVLTGVRPGE VSKKMRIQYL
NIHGYHNGPY KGFEGWVRLA RDLYNAIYSP IHQLSGLNIS KDEIPTDKGF VTRKMISDVN
IIEDGKTPIE ERPYTGECDI VTRLRGKKYP KLEPQQPLGM VMEGGEAING
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