Gene Mbar_A1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1538 
Symbol 
ID3625252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1897320 
End bp1898135 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content46% 
IMG OID637700419 
Producthypothetical protein 
Protein accessionYP_305066 
Protein GI73669051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA GGGATGATCC TGATTTTTTA TCATTAGGCA CGATAAAAGG GGGCGAGGTC 
GCCAATAGGG CAGGAGAAGG CCTTGGGAAG ATTGAAGAAT TAATGATTGA CCTTCAAAGT
GGAAGGATAG CATACGCCGT ATTGTCTTTT AGAGAATTTA TAGGTCTGGG AGACAAATTT
TTTGCTATTC CCTGGCAATC TCTTTCTCTG AGGCTGCACG ACCACGCCTT CTTACTTGGC
ATTACTAAAG AAACCCTGGA AAAGACAGGA AGCCTTGAAA AAGGCAACTG GCCTCTGACT
CGTGAAGAAC TTGCCGGAAC TTATGCTTCC TACGGGTACC AGCCTTACTG GCAGGCAGAC
ATAACGGGAC AACCAGGAAT GACAGAAGAG GCCGAATCGG AAAGGATGTC CCGGATGGAA
ACTATGGCAG GCAGGGCCAA TCCGGATTTT TTGTCAGCAG GTACAATAAA AGGGGATAAG
GTTGTCAATA AAGCAGGAGA GCACCTCGGG AAGATTGAAG AATTAATGAT TGACCTTGAA
GATGGAAGAG TAGCATATGC TGCACTATCT TTTGGCGGAT TTTTGGGTCT GGGCAGTAAG
CTGTTTGCTA TACCCTGGCA GGCTCTTCAA ATGAAACTGC ACGATCACGT TATTCTGCTT
GACATTCCCA AAGATGTTCT GGAGAAAGCA GAGGGTTTTG ATAAGGAGCA CTGGCCTGTA
ACTAACCGTG AGTGGCTTTC TGCAATGTAC AGTTACTACG GATACCAGCC TTACTGGCAG
GCACAGAGAA TCGAAAACCG GCCAGGAAAT CTCTGA
 
Protein sequence
MADRDDPDFL SLGTIKGGEV ANRAGEGLGK IEELMIDLQS GRIAYAVLSF REFIGLGDKF 
FAIPWQSLSL RLHDHAFLLG ITKETLEKTG SLEKGNWPLT REELAGTYAS YGYQPYWQAD
ITGQPGMTEE AESERMSRME TMAGRANPDF LSAGTIKGDK VVNKAGEHLG KIEELMIDLE
DGRVAYAALS FGGFLGLGSK LFAIPWQALQ MKLHDHVILL DIPKDVLEKA EGFDKEHWPV
TNREWLSAMY SYYGYQPYWQ AQRIENRPGN L