| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1535 |
|---|
| Symbol | |
|---|
| ID | 3625249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1893595 |
|---|
| End bp | 1895643 |
|---|
| Gene Length | 2049 bp |
|---|
| Protein Length | 682 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637700418 |
|---|
| Product | sensory transduction histidine kinase |
|---|
| Protein accession | YP_305065 |
|---|
| Protein GI | 73669050 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATAG CAGATGTAAG GAAAAACACA CTAAATATAG ACTTCTATGA ATTAATGGTC
TGGATGACCA TAATCATTTT GCTTTATCTA ATTAGCCTTA ACAATTACCT CCTTTTCCAT
ATAGTAATAG AATTATTCAG CGTTTACTTT GCATACATGA TATTCCTAAT TATATGGAAG
TCAAGAAGCC GTCTGGAGAA TCGATACCTT CTGATATTGG GAGTTGGCTA CTTTTTTGTC
GGAAGTTTCG ACTTTCTAAG TACACTTGCA TTCCATCACT TGAGAGTATT TCCCGGGTTT
GATACAAACC TGAATGCTCA GTTCTGGATC GTTGCAAGAT TCCTGGAAAG TACTTCTTTT
CTGGTAGCTC CACTGTTTTT GATACGCACT GGAGAGAACC AGGAGAGAAA TATCAAAACC
CTTGAAAGCT CAATTTTTGC CTTGAAGGCA TTTCTTGTAT ATGCAGTAAT TAGTGTTGCC
TGCCTGATTT CAATCTTTTT TTCTGCAAAT TTCTCGGATT CTTATTTCCA GAGTTCAGGA
TTTACTCAAT TCAAAGTAGC AAGTGGATAC TTAATTCCTT TCATGCTTCT ATGCTCACTT
TTTCTCCTGT ATGTTGTCAG GGAGAGGTTC GAAGAAAAAG TTTTCAGTTT ACTTTCAGCC
TCCCTGGTCC TTACGGGTTT CATGTCATTG TTATTTGCAT TCGACAGTCA AATGGGCGAG
GCTCCGAGCA TTATAGGTCT CTTCTTTAAA TTATTGTCTT TTTATCTGGT CTATAAAGCA
ATCTTAGATG TTGGGTTCGA AGAACCTTGC AGTCTTTTAT TCAGGGAGCT TAAACACCGA
GAAGAAGATT TCAGGCAGAA AGCCATTTTC TTTGGGGACG AGTATGGTCA TATTTGCAGG
ATGGTAGGCA AGAGATACCT GACTGAACAT CGAAATGCTG AGGAAGAAGA CAATCCCAAA
GATGGGCCAG ACAGTTATAG TTCCTATATG CAAAATCTTC AGGGAATTGG ATTTCAGTTT
AATAAGGATT TTAAATTGAT ATTTCTCCAT GGTCCTGTTG AGGAAATGAC AGGTTATCCA
AAGCAGGATT TCCTCTCTGG AAAAATTGAC TGGCAGGAAA TAATAATACC TGAAGACCGC
TCTGTTATTT CTAAAAAAGA GGATAAACTA AAGTTAAATC TTAATTCTAT CGTTGAAAGC
GAATATCGGA TAAAGAAAAA AGACGGGGAG ATAAAATGGG TTCGTGAGAT TATCCAGAGA
ATCTCGGATG AATCCGAAAG TTCGGGAAAG TTTCAGGGTC TGGTTTATGA TATCACTGAA
CGCAAAATAG ATGAAGAAGT TCTGGAAAAA ATAGATAAAA TTCGATTAAA AGAAGTCCAT
CATCGCATAA AAAATAACCT CCAGGTAATC TCATCTCTCC TCAGCCTGCA GGCAGAAAAA
TTTGAAGATA AAGAGGTACT CGAAGCCTTT AGAGAGAGCC AGAATCGAGT CGAATCTATT
GCGATGATCC ATGAGAGACT TCATGAGAGT GAAAATATGG ATGCTTTTGA TTTCTCAGAC
TACCTAAGAA AACTAACAAC AGATCTTTTC AATTCCTATA ATGTAGGAAA CAGGAATATA
AGCCTCAAAT TGAGCCTTGA ACAGGTTTAT TTGGGTATGA GTACTGCCAT CCCTCTTGGA
ATTATTGTAA ATGAGATCGT TTCAAATTCC CTGAAGCATG CTTTTCCCGC GGGAAAAAGA
GGCGAAATCA GCATAAATTT TTGTAAAGCT GAAACTTTAG TTGCAAAGTA CGGGACTTCA
TGCTCGGAGA AATACTGTCC ATATGAGGGG GACTATACGG ATTATAAGGA CTGTATAAAC
AATAATTTCC GTTACATACT TACAGTAGCC GATAACGGAA TAGGAATTCC CGAAGAACTC
GACTTTCAAA ATACCAACTC CCTGGGGCTC CAGCTTGTGA ATATTCTTGC CAAACAAATA
GGCGGGTGTA TAGAGCTTAA AAGGAATCAG GGGACAAAAT ATATTATCTG TTTCAGTAAT
GAAGGGTAA
|
|---|
| Protein sequence | MNIADVRKNT LNIDFYELMV WMTIIILLYL ISLNNYLLFH IVIELFSVYF AYMIFLIIWK
SRSRLENRYL LILGVGYFFV GSFDFLSTLA FHHLRVFPGF DTNLNAQFWI VARFLESTSF
LVAPLFLIRT GENQERNIKT LESSIFALKA FLVYAVISVA CLISIFFSAN FSDSYFQSSG
FTQFKVASGY LIPFMLLCSL FLLYVVRERF EEKVFSLLSA SLVLTGFMSL LFAFDSQMGE
APSIIGLFFK LLSFYLVYKA ILDVGFEEPC SLLFRELKHR EEDFRQKAIF FGDEYGHICR
MVGKRYLTEH RNAEEEDNPK DGPDSYSSYM QNLQGIGFQF NKDFKLIFLH GPVEEMTGYP
KQDFLSGKID WQEIIIPEDR SVISKKEDKL KLNLNSIVES EYRIKKKDGE IKWVREIIQR
ISDESESSGK FQGLVYDITE RKIDEEVLEK IDKIRLKEVH HRIKNNLQVI SSLLSLQAEK
FEDKEVLEAF RESQNRVESI AMIHERLHES ENMDAFDFSD YLRKLTTDLF NSYNVGNRNI
SLKLSLEQVY LGMSTAIPLG IIVNEIVSNS LKHAFPAGKR GEISINFCKA ETLVAKYGTS
CSEKYCPYEG DYTDYKDCIN NNFRYILTVA DNGIGIPEEL DFQNTNSLGL QLVNILAKQI
GGCIELKRNQ GTKYIICFSN EG
|
|---|
| |