Gene Mbar_A1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1532 
Symbol 
ID3625246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1890828 
End bp1891505 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content41% 
IMG OID637700416 
Producthypothetical protein 
Protein accessionYP_305063 
Protein GI73669048 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAAT TAGTAAGTAA AGGTAAAAGT AGTGAAATAC AAATTCCAAT CGATTCTATT 
ATACTTGAAG GAAACCTCAC AATTCCTGAA GGAACAAAAG GAATTGTTGT TTTTGCACAC
GGCAGCGGGA GCAGTCGTTT TAGTCCTCGG AATAGGTATG TTGCGCAGGA ACTTCAGAAA
GAAGGCCTTG GAACACTGTT ATTTGATCTG TTGACAGCTG AGGAAGAGAG AATTGATATG
ATAACTGCGC ACCTCAGGTT TGATATTGAC ATGCTTGCAA ACCGGCTTGT TAACGTAACA
AACTGGCTTT TAAGCAATCC TGATACTAAA AATCTTAATA TAGGTTACTT TGGTGCCAGT
ACGGGAGCTG CAGCCGCACT CATAGCTGCA AAAGAGCATG CGAATATTAT AAAGGCGGTA
GTTTCCAGAG GAGGAAGGCC TGATCTGGCT GAAAAAGCCC TGCCGGATGT AAAGGCACCA
ACACTACTTA TTGTAGGTGG AGAGGATTAT CAAGTAATAG AAATGAATCA GTGGGCATTA
GACCGATTGA AAGCAGAACA AAAAGAACTT AAAATTGTTC CCGGAGCAAC TCATCTTTTT
GAAGAACCGG GAACATTAGA ACAAGTCGCA AATCTGTCTG GAGAATGGTT TAAAAGACAT
CTTCGAGAAG AAAAATAA
 
Protein sequence
MGELVSKGKS SEIQIPIDSI ILEGNLTIPE GTKGIVVFAH GSGSSRFSPR NRYVAQELQK 
EGLGTLLFDL LTAEEERIDM ITAHLRFDID MLANRLVNVT NWLLSNPDTK NLNIGYFGAS
TGAAAALIAA KEHANIIKAV VSRGGRPDLA EKALPDVKAP TLLIVGGEDY QVIEMNQWAL
DRLKAEQKEL KIVPGATHLF EEPGTLEQVA NLSGEWFKRH LREEK