| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1520 |
|---|
| Symbol | |
|---|
| ID | 3626921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1876415 |
|---|
| End bp | 1877452 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637700405 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305052 |
|---|
| Protein GI | 73669037 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.806192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTTC TTTGTGTATC ATTATCCTGT TCTGCAAGCG CAGGTGATAG TAAATTGAAT
GATTCTAAAT ATAATGGACT CTCTGATCCC TCTATACAAG AATTTGCAAA CGACTCCTCG
TTCATAGCAT ACAGAGGAAT CTTACCTGAA ACAGTTGACC AAGCGTGGGA AAATTCAATT
GCTAATTGCT GGCTAAATCT CACCCTTATG GGGCCATTTT ATTCAGAGCT TGACAACTCT
ATAAATAGCG TTGCCACCAA CAATAAAATA ATAATAATTG AATTAAGTCC TTCATATAAA
GAAGAAATGA ATGATTCCAG AATTAACAAG ATCTATCAAA ATATTACTAA TTATTGCGAA
CAGCAAGAAG GTATAAGTGA CATACCTGTG GTCTTTATGT GGGCACAAGT CAAAGAAGAT
TTTTCGTTAT CAGATTATGG TCCTGAATCT TTTGAAGAAG CTAAAAAATT GTTTCCAGGA
TTTATAACTG CTCGAGGAAC GATGCCTGAA ATTCACCAGG AAGAAGAAAA AAGTGAATGG
GTAGATTTAC TTACTGAGTA TAGTCGTTCT AGTTCTAGAC CTGCAGGAAT TAATCCATAT
TTGACTACAT TCGGCGGTCC AGTTAATAGT TTTGGAGCCC ACATACATGG ATATTTAATA
GTAGGTTTCG AGGAATCCAC TGCAGGGAAA GTGAATGAAT CAGTAATTGA TGAAATATAT
CAAGTAATAG ATGAGCACTT TAAAAAGAAA GGCATCAGTG ATGTACCTGT AGTTTTTACT
TTCATACGCA TAACGGATGA TTTAGCACCA GCCAATGAAT CATACATAGA TGACGAAACT
GTTGCTATCA AAGACAAAGA CGGAAATTAT ATAGATGTAA GCAAAAATGA GATCGATATC
AACAAAGATG GAAATCTTAC AATTAAAGAT AATAAAACAA AACAAAAAAC TAATGGGACA
ACCAATCAAA CGTCTGGATT TACTTCAATA ATGGTTATTT TAGGGATTTT ACTGTTGTCG
GTCATCAACC GTTTATAA
|
|---|
| Protein sequence | MLFLCVSLSC SASAGDSKLN DSKYNGLSDP SIQEFANDSS FIAYRGILPE TVDQAWENSI
ANCWLNLTLM GPFYSELDNS INSVATNNKI IIIELSPSYK EEMNDSRINK IYQNITNYCE
QQEGISDIPV VFMWAQVKED FSLSDYGPES FEEAKKLFPG FITARGTMPE IHQEEEKSEW
VDLLTEYSRS SSRPAGINPY LTTFGGPVNS FGAHIHGYLI VGFEESTAGK VNESVIDEIY
QVIDEHFKKK GISDVPVVFT FIRITDDLAP ANESYIDDET VAIKDKDGNY IDVSKNEIDI
NKDGNLTIKD NKTKQKTNGT TNQTSGFTSI MVILGILLLS VINRL
|
|---|
| |