Gene Mbar_A1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1518 
Symbol 
ID3626919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1875065 
End bp1875700 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content47% 
IMG OID637700403 
Producthypothetical protein 
Protein accessionYP_305050 
Protein GI73669035 
COG category[R] General function prediction only 
COG ID[COG1326] Uncharacterized archaeal Zn-finger protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAG AAATTGAAGT TGAGTGCCCT TCATGCTCCC CTGAAGAAGA GGTAGGGCAC 
GAGGTTCTTA AAGAGGGGCA GAGTCCGCTT GTTCGCTGTC TGGAGTGCGG GCAGGTGCAT
GCAGTGAAAC TTAAACCCCC TAAATCCGTC AGTTTGAAAG TGATAGTCAG TAAGATGGAC
ATTTCGGACA CTTACAAAAC TGAACTGGAT TCCGAGACAG TCCTTCAGGT AGACGATGAG
CTGGTTGTAG ACGATGAGGA AACAGGAGTA GTGGTGCCTA TCCTGATTAC TGCTCTTGAT
GCAGGAGGAA AACGAGTCCT GATTGCCCGG GCAGAAGATA CTGAGACAAT CTGGGGCAGA
GCCATTGATG AAGTGACCAT AAAATTTTCC GCACAGGCAG GGACTGAAAA AACCGAAGTT
CTTGAAAAAC GTGTGCCTGG CGATTATGAA TTTGTCGTAG GAGCCGAAGA AAGAGTGGGG
AATAAACGCC TTTTCATTAA CAAAATCAAG GTGAGAGATG GGGCATTCCG ATCTAGAAAA
GGCGATGTTG TGCTTGCAAA ATACGTAAAA AGGATTTTTG CGAGAAAGAA ATGGGAAGGT
TCGGGTCAGC GTGAATTCCG AAGAGGGCCG TGGTAA
 
Protein sequence
MTREIEVECP SCSPEEEVGH EVLKEGQSPL VRCLECGQVH AVKLKPPKSV SLKVIVSKMD 
ISDTYKTELD SETVLQVDDE LVVDDEETGV VVPILITALD AGGKRVLIAR AEDTETIWGR
AIDEVTIKFS AQAGTEKTEV LEKRVPGDYE FVVGAEERVG NKRLFINKIK VRDGAFRSRK
GDVVLAKYVK RIFARKKWEG SGQREFRRGP W