Gene Mbar_A1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1508 
Symbol 
ID3627695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1866700 
End bp1867380 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content43% 
IMG OID637700394 
Producthypothetical protein 
Protein accessionYP_305041 
Protein GI73669026 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAT CGGATACTTT TAACCTTGAA GATTCACAGG CAAACCACAC GAAAAATCAT 
TTCCTTGCCT GGGACAAAGA ATACACCCAC CTGAAATGGG GCGGACCTGC CCCTGTCAGG
AATATCCAGG CTCATCTTCT GCCAGGATCC AGAGTTCTTG ATGCAGGTTC AGGAAATGGT
AGATACCTTG GGGAACTTGC AAGGCATTAC AATGCAGTAG GGATTGACAT TTCTATAACG
GCTCTAAAAG GTTCCAGAGC TCAGCTTTCA AGGAGCGACA GGTTTGCCGA ACACCTTGGC
GCAAGTATCT CGGACCTTCC CTTCAAAGTC CAGACTTTTG ACGGAATTCT CTGTTACGGG
GTACTTCAGC ACCTCTTTAA AGAAGAAAGG AAATCCGCTG TCGAAGAGTT CAGTTATATA
CTTAGAAAGG GCGGTTTTTT CTTCTTTGAG GCCTTCGGTT ATAAAGATAT GCGCTGCGGA
GGAGAAGCTT CAACCCCTTT TGAGGAGAGG ACTTTTTCCC GTCAAAACGG AATAATCTAC
CACTATTTTA CTAAAGAAGA GATCAGAGCA CTTTTCAAGG GATTCGACAT TATAGAGCTG
GAAGATGTAA TAAAAGAAAA AGTTTTCAAA GGGAAAGTTT ACAGAAGGCA TCTGATAAAA
GGAATCTTTC GAAATCCTTG A
 
Protein sequence
MDKSDTFNLE DSQANHTKNH FLAWDKEYTH LKWGGPAPVR NIQAHLLPGS RVLDAGSGNG 
RYLGELARHY NAVGIDISIT ALKGSRAQLS RSDRFAEHLG ASISDLPFKV QTFDGILCYG
VLQHLFKEER KSAVEEFSYI LRKGGFFFFE AFGYKDMRCG GEASTPFEER TFSRQNGIIY
HYFTKEEIRA LFKGFDIIEL EDVIKEKVFK GKVYRRHLIK GIFRNP