Gene Mbar_A1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1497 
Symbol 
ID3627683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1852573 
End bp1852896 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content39% 
IMG OID637700384 
ProductPadR family transcriptional regulator 
Protein accessionYP_305032 
Protein GI73669017 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.452189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATACCGT CGCAAATGCT CAAAGGAATA TTGGAAAACT GTATATTAAA AGTAATCAGC 
GGTGACGAAA CTTACGGATA TGAAATTTCA CAGCAATTGC AGAAATATGG TTTTTCAGAT
ATTTCAGAAG GCACGATTTA TCCGCTCCTG CTCCGCCTTG AAAAGAACAA TCTCATAAAG
GCAAAATATC GTGAGTCGGC TCTCGGACCA AAACGCAAGT ATTTTTCCAT CACACCGGCC
GGGGAAAAAG AATTGGAGGC ATTCATAAAT AATTGGCAAG AGCTCAATCA TGCTGTAAAT
CAATTATTTC ATATTGGGGA ATGA
 
Protein sequence
MIPSQMLKGI LENCILKVIS GDETYGYEIS QQLQKYGFSD ISEGTIYPLL LRLEKNNLIK 
AKYRESALGP KRKYFSITPA GEKELEAFIN NWQELNHAVN QLFHIGE