Gene Mbar_A1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1494 
Symbol 
ID3627680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1846299 
End bp1848377 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content44% 
IMG OID637700381 
ProductDNA mismatch repair protein MutL 
Protein accessionYP_305029 
Protein GI73669014 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAG AACATATTGA AGGGAAGAAA GAAGCTAAGG GAAATAAAAT TCGGCTCCTT 
GATAAGGATA CGATAAACAA AATAGCGGCC GGAGAGGTAA TTGAACGCCC TGCATCCGTA
GTAAAAGAGC TGATAGACAA CTCAATCGAT GCAGGAGCTA CGGACATCCG CATCGAAGTC
GAAAAGGGTG GAAAACGCTC CATTCTTGTC CGGGACAACG GATGTGGAAT GGACAGAGAA
GATGCCCTGC TTGCATATAA AAAGCATGCA ACTAGCAAGC TCACAAGGAT TGAAGATCTT
AATACTATTT CTACAATGGG TTTCAGGGGA GAGGCTCTTT CGTCTATCAC AGCGGTTGCA
AAGGTGGAGA TTCTTACCAG GCCCCCAGAA GAAATTACAG GTACCAGGAT AGTGATCCAT
GGGGGAAAAG TTCTGGAAAC TTCAGCTGCA GGCACGACTC CGGGTACGTC TGTGAATGTA
AAAGACCTGT TTTACAACAT CCCGGCAAGG CAGAAATACC TCAAAAGCGA CCGTACCGAG
CTTGCCCATA TTACAGATAC GGTAATGCAG CTTGCTCTGG CAAATCCGCA TATTTCCTTT
ACTCTGCTCA GTGAAGAAAA GCCAGTCATA AGAAATGCAG GCTCAAGCGA GTCTTTCAAA
AGTATTGTAA ATCTTCTGGG CCCGGATACG GCTCGTTCAA TGCTTCCCCT GGAGTACAGG
ACCGAAGATT TTGAAATTTT TGGATACATC TCAAAGCCTG AAACCACTCG ACGAGAAAGC
GACCAGATTT TCCTGTTCGT AAATACTCGC CCGGTAACCT CAAGGTCCAT TAATAAAGCT
ATTCGCGAAG GATATTATAC CAAAATTCCG AAAGAGCGCT ATCCTGTAGC AGTGCTCTCT
CTTATTGTCA ATCCCGGGGA AGTGGACGTT AATGTACATC CCCGAAAAGC TGAGGTTCGT
TTCAGCCGGG AGAAAGAGCT TGGGGATGCG GTCACATCTG CAATAGAAAA AGTACTCTCC
GAAAATGCTC TGGCTCCTGA AATTCGGGAA AAAAGAGACC GAGTTTTTCA GAAAACCTTC
GATGTTTCAG GTTCTCCAGG TAGATTACAG GTCTCTGAAG CTGCGGAAAT TTTTGGAAGG
AAAGAGATTG GAAAGGATAC CAGGATTCCG AAGACCGGAA TTCTGGAAAC TGGACTTCCT
GAAAGAAGCA AAGTTATGAG AAATAAGGCT GAGACCTATG TTTATCCGGT AAAAGATACC
GAAAGGAGGC TAAAACGTTC CGAGCGCCTT CTGGACTTTA CCACAGAGGG AGAAACGCAG
GAAACAGGTG ATAAAAAGCT GGATAATAAA ATCGAGCAGG AAAGAGAGAA AGAAGGAGAA
CGTAAAAAGA GAATAACAGG TATTCAAGAG AATGGAATTG AAAAAGCAGG CTCGGAAGAA
CAGAAATTTG AGGGTATAAA TGCCGAAAAG ATGCAAAAGT CTATACAAAA ACCGAATACG
GATTCTTTCG AAAACTTGAG GATTATCGGG CAGGTATCTA AGCTGTATAT CCTTGCCGAA
AGGGGAGAAG ACCTTGTGCT TATCGACCAG CATGCTGCTC ATGAGAGAAT TCTTTACGAG
CAGGTTTTAA AAATGAAAAA GTCCAGGGTG CAGGAGTTGA TCACACCTGT AACCATAGAC
CTTACACCTA AAGAAAAAGT GCTTATGGAA GAGTATATTC CTTATCTGGA AGATTTCGGT
TTCGGGATTT CAGAATTTGG GGACAATACA TACGTAGTCA CCTTCGTACC TGAGGTATTC
GGACGGCTTG AAGACCCCGA GGTTATCCAC GACATAGTTT CGGACCTTTT AGCTTCAGGA
AAAGTTAAAA AAGATACAGG AATCTCGGAA AAGATCTGCA AGACCCTCGC ATGCAGAGCT
GCAATCAAAG GTGGAGCTGC CTGCAGCCCC AGACAGATGG AAGAGCTAAT AGAGCAGCTT
AAGAAAGCTG AAAATCCTTA CTCCTGTCCA CATGGCAGGC CCACTGTGAT CACATTTACG
AAAGGGGAAC TAGACCGCAT GTTTGCAAGA ATCCAATAA
 
Protein sequence
MMEEHIEGKK EAKGNKIRLL DKDTINKIAA GEVIERPASV VKELIDNSID AGATDIRIEV 
EKGGKRSILV RDNGCGMDRE DALLAYKKHA TSKLTRIEDL NTISTMGFRG EALSSITAVA
KVEILTRPPE EITGTRIVIH GGKVLETSAA GTTPGTSVNV KDLFYNIPAR QKYLKSDRTE
LAHITDTVMQ LALANPHISF TLLSEEKPVI RNAGSSESFK SIVNLLGPDT ARSMLPLEYR
TEDFEIFGYI SKPETTRRES DQIFLFVNTR PVTSRSINKA IREGYYTKIP KERYPVAVLS
LIVNPGEVDV NVHPRKAEVR FSREKELGDA VTSAIEKVLS ENALAPEIRE KRDRVFQKTF
DVSGSPGRLQ VSEAAEIFGR KEIGKDTRIP KTGILETGLP ERSKVMRNKA ETYVYPVKDT
ERRLKRSERL LDFTTEGETQ ETGDKKLDNK IEQEREKEGE RKKRITGIQE NGIEKAGSEE
QKFEGINAEK MQKSIQKPNT DSFENLRIIG QVSKLYILAE RGEDLVLIDQ HAAHERILYE
QVLKMKKSRV QELITPVTID LTPKEKVLME EYIPYLEDFG FGISEFGDNT YVVTFVPEVF
GRLEDPEVIH DIVSDLLASG KVKKDTGISE KICKTLACRA AIKGGAACSP RQMEELIEQL
KKAENPYSCP HGRPTVITFT KGELDRMFAR IQ