Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1486 |
Symbol | |
ID | 3627543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1835846 |
End bp | 1836523 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637700372 |
Product | hypothetical protein |
Protein accession | YP_305021 |
Protein GI | 73669006 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.29092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTATAT CGGGGAAAAC ACACCTTAGG GGAGCTAATC TTATAGGAGC TAAACTTCAA GGAGCGGACT TGCAAGAGGC TGACCTTGTA AAAACTAACC TTGAAGGAGC TGATCTTCGG GGAGCTAATC TTAAAAAGGC TGACCTTCGA GGAGCCAACC TTTCAGATAC TCACCTTCTT GAAGGTAAAG GAGCTAATCT TCAAGAGGCT AACCTTCAAG AAGCTAATCT ACAGGGAGCT AGTCTTGTAA AAACTAATCT TGAACAGGCT AACCTTGAAG GAGCTAATCT TCAACTGGCT AACCTTCATC TGGCTAATCT TAAAGGAGCT AACCTTAAAA AGGCTAACTT TCAAGTGGCT AATCTTGAGG GAGCTCACCT GCAGGGAACT AATCTTGAAG AGGCTGACCT GTATGGAGCT GGCCTTCAAG AAGCAAATCT TCAAGAGGCT AACCTTAGAG GCGCTAATCT CTATGGGGCA GACCTTCACA AAGCCTATCT TCTGAAAGCT GATCTTGAGG GAGCTAAGCT TGAAGGGACT AACCTTACAG GAGTTCATGA TTTATCCATT GAACAAGCTT CTAAAGTGAA AACACTTTAT AACGCAAAGT TAGACGAAGA GATCCTGATT CCATTAAAGG AGAAGTATCC TGCCCTGTTT GAAAAAAACG GGAAATGA
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Protein sequence | MGISGKTHLR GANLIGAKLQ GADLQEADLV KTNLEGADLR GANLKKADLR GANLSDTHLL EGKGANLQEA NLQEANLQGA SLVKTNLEQA NLEGANLQLA NLHLANLKGA NLKKANFQVA NLEGAHLQGT NLEEADLYGA GLQEANLQEA NLRGANLYGA DLHKAYLLKA DLEGAKLEGT NLTGVHDLSI EQASKVKTLY NAKLDEEILI PLKEKYPALF EKNGK
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