| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1474 |
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| Symbol | |
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| ID | 3627531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1814018 |
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| End bp | 1815763 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637700362 |
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| Product | cell surface protein |
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| Protein accession | YP_305011 |
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| Protein GI | 73668996 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.12576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATTA ACAAAAAATC GTATTCAGTG GTTATAGCAT CAGCAGTTCT GATTTTATTT
TTGATTTTCG TTTCATCTAC GGCATCATCA GCTTCTCCAT CTGCAATCAC TGAAACTCGG
ATAACCAACC ATGGAACGGC ATCCAATCCA GATATCTATG GTGACAAGAT AGTGTGGCAG
GATAACCGCA ATGGAAACTG GGATATATAC ATATTTGATC TCTCCACCAA AATAGAAATT
CACACTACCA ATAAAACAGA TCAGATAAAT CCTGCTATTT ATAAAAATCT GGTAGTTTGG
GAGGATGAGC GCAACGGAGG TCATGACATT TACGTGGAAG ATCTCTCTAC AAAAATACAA
ACTTGTATCT CTAAAAGTGG AATGGCACAT AATCCTGCAA TCTATGGTAA TAGAATAGTG
TGGCAGGACG AACGTAATGG AAGTTCTAAT CTCTACATGT ACGATCTATC TACTAAAAAA
GAAACTCAGA TTACTACCAG CGGTAAAGCA TTTTATCCTT CTATATACGA TAATAGAATA
GTGTGGCAGG ACGAACGCGA TGGAGATTAT CGCCACCCTG ATATCTACAT GTACGATCTT
TCCAATAAGA AGGAGACTAA AATATCAACA ACAAAATTCA CCATTGGTGG TCATTACTCG
CCTACAATTT ACGGGAACAG GGTAGTGTGG GTAGGTGCCA CTACTGATTA TGATTACATT
TACGGTATTT ATGTAATGGA TCTCTCTACT AAAAAGCAAA ATATAATCCT TAAATCCACT
GATGAAATAG GCAACCCTAA AATCTACGGT GATGATATCG TATATTCTCT TGCTATGACT
GGCGATGGTT TTCCTGATAT CTATATGTAT AATCTCTCCA CTTCCGAGAG AAAAAAGATA
TCCACCAGTC AAACAGCGAA AGAGCCTGAT ATTTATGGTA ACAAAATAGT ATGGGTGGAC
TGGAGAAATG AAGGTCCTGA TATTTACATG GCTACTCTCG GTTCAGACCT CCCTGTAGTT
GCTTTTTCTG CATCCCCAAC TTCTGGGAAA ACACCATTAA ACGTTAAATT TACTGACACC
AGCACTGGCT CCCCAACTTC CTGGTTCTGG AACTTTGGAG ATGGTTCAAA GTCATTCCTC
CAGAATCCGG TTCATAAGTA TTCAAAAGCA GGAACATATA CTGTTAGCTT AACAGTAAAG
AATGCGGCAG GACGTAACAC GATAACAAAA TCAAAGTATA TAACCGTGAC AACAAAACCC
GTTGCTGCTT TCTCTGCATC TCCAACCTCA GGAAGAGTAC CATTAAAAGT TAAATTTACT
GACAAAAGTA CAGGAATACC AACGAAATGG AAATGGGATT TTGGAGACGG AACAAAGTCA
TTCCTTCAGA ATCCGACTCA TAAATATTCC AAAGCAGGAG AATACACAGT AACTCTCAAA
GTAACCAATG CAGCAGGCAT CAACACAGCA ACAAAATCAA AGTATATAAC CGTGACATCA
AAACCCGTTG CTGCCTTCTC TGCATCTCCA ACCTCCGGAA AATCCCCATT AAACGTTAAA
TTTACTGACA AAAGTACAGG GTCACCGACC AAATGGAAAT GGGATTTTGG AGATGGAACA
AAGTCATTCC ACCAGAATCC AATGCATAAG TATTCCAAAG CCGGAAAATA CACAGTAACC
CTCAAAGTAA CCAATGCGGC AGGCATCAAC ACAGCAACAA AAACAAAATA TATAACCGTG
ACATGA
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| Protein sequence | MKINKKSYSV VIASAVLILF LIFVSSTASS ASPSAITETR ITNHGTASNP DIYGDKIVWQ
DNRNGNWDIY IFDLSTKIEI HTTNKTDQIN PAIYKNLVVW EDERNGGHDI YVEDLSTKIQ
TCISKSGMAH NPAIYGNRIV WQDERNGSSN LYMYDLSTKK ETQITTSGKA FYPSIYDNRI
VWQDERDGDY RHPDIYMYDL SNKKETKIST TKFTIGGHYS PTIYGNRVVW VGATTDYDYI
YGIYVMDLST KKQNIILKST DEIGNPKIYG DDIVYSLAMT GDGFPDIYMY NLSTSERKKI
STSQTAKEPD IYGNKIVWVD WRNEGPDIYM ATLGSDLPVV AFSASPTSGK TPLNVKFTDT
STGSPTSWFW NFGDGSKSFL QNPVHKYSKA GTYTVSLTVK NAAGRNTITK SKYITVTTKP
VAAFSASPTS GRVPLKVKFT DKSTGIPTKW KWDFGDGTKS FLQNPTHKYS KAGEYTVTLK
VTNAAGINTA TKSKYITVTS KPVAAFSASP TSGKSPLNVK FTDKSTGSPT KWKWDFGDGT
KSFHQNPMHK YSKAGKYTVT LKVTNAAGIN TATKTKYITV T
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