| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1458 |
|---|
| Symbol | |
|---|
| ID | 3627739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1792392 |
|---|
| End bp | 1793441 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637700346 |
|---|
| Product | heme biosynthesis protein |
|---|
| Protein accession | YP_304995 |
|---|
| Protein GI | 73668980 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCA TGACAAATGC ACCAAGGCTT ATCGCATGGG AACTGACTGC AGGATGCAAC
CTGAACTGCG TACACTGTAG GGGAGCTTCC ACTTCATCGG TTCCGGCAGG TGAACTTACA
ACTGATGAGG CTAAACACTT CATTGACGAA GTTGCAAGTA TTGGAAAACC CATTCTTATA
CTGAGCGGAG GCGAGCCTCT GACCAGGCCT GACGTTTTTG AAATCGCACG TTACGGTACT
GATGCTGGGC TTCGAGTCGT ACTTGCAACA AACGGGACTC TTCTTACGCC TGAAATTGTT
GAGAAATTAA GAGCTGCTGG AGTGCAAAGG CTCAGCGTTA GTATTGATGG AGCAAACGCA
GAGACACACG ACAATTTCAG AGGCATGCCC GGGGCTTTTG AAAGAACACT TGCAGGCATT
GAAGTCCTCA GGAAAGCCGA TTTTCCTTTT CAGATCAATA CCACGGTCTC AAAACGCAAC
CTTGAGGAAA TCACTAAGAC TTTTGAGCTT GCAAAAGAGC TTGGTGCAGT TGCATATCAT
GTCTTTTTCC TTGTGCCCAC AGGCAGGGGA GACGAATCCG ATGAGGTTTC CCCTGCAGAC
TACGAGCGCA TTCTACACTG GTTTTATGAA ATGCAAAAAG AATCAAAAAT CCAGTTGAAA
GCAACCTGTG CTCCCCACTA TTTCAGGATA ATGCGCCAGC AAGCAAAAAA AGAAGGAATT
GAGATATCGG TTAAAACCCA CGGCTATGAA GCAATGACAA AAGGCTGCCT CGGAGGTACA
GGCTTCTGTT TTGTATCAAG TGTGGGTAAA GTCTTCCCTT GCGGCTACCT TCCAGTTCTT
GCCGGAAACA TAAGGGAACA GCCTTTCAGG GAGATCTGGG AAAACGCCGA GGTCTTCAGG
AAACTGAGAG ACCCCGAAGA GCTTAAAGGA AAGTGCGGGA TATGTGAATA CAAAAAAGTC
TGTGCAGGCT GCAGGGCAAG AGCCTATGCT GCTACAGGCG ACTATCTCGA AGAAGAGCCT
TACTGCATAT ACAGGCCCGG AAAAAAGTGA
|
|---|
| Protein sequence | MIAMTNAPRL IAWELTAGCN LNCVHCRGAS TSSVPAGELT TDEAKHFIDE VASIGKPILI
LSGGEPLTRP DVFEIARYGT DAGLRVVLAT NGTLLTPEIV EKLRAAGVQR LSVSIDGANA
ETHDNFRGMP GAFERTLAGI EVLRKADFPF QINTTVSKRN LEEITKTFEL AKELGAVAYH
VFFLVPTGRG DESDEVSPAD YERILHWFYE MQKESKIQLK ATCAPHYFRI MRQQAKKEGI
EISVKTHGYE AMTKGCLGGT GFCFVSSVGK VFPCGYLPVL AGNIREQPFR EIWENAEVFR
KLRDPEELKG KCGICEYKKV CAGCRARAYA ATGDYLEEEP YCIYRPGKK
|
|---|
| |