| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1452 |
|---|
| Symbol | |
|---|
| ID | 3626133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1784066 |
|---|
| End bp | 1786063 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637700340 |
|---|
| Product | ferrous iron transport protein B |
|---|
| Protein accession | YP_304989 |
|---|
| Protein GI | 73668974 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.789379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTGAAA AAAAGATAAG GGTTGCACTT ACCGGAAACC CCAATGTTGG TAAGACAACA
GTTTTCAATG CTATCACCGG AGCCAGACAA AAGGTTGGAA ACTGGCCAGG GGTAACAGTT
GAGAAAAAAA TAGGTATAAA GGAATACGGA GATTGTGTTC TTGAAATAGT AGATCTTCCG
GGGACTTACA GTCTCACAGC CTATTCTGCA GATGAAGTTG TTGCCAGGAA TTACATACTT
GAAGAAAAAC CTGATATTGT AGTACAGATC CTTGACTCTA CAAATCTTGA GCGTAACCTC
TATCTGAGCA CTCAATTGCT GGAAATGGAT AAGAACATTA TCCTTGCCCT TAATATGACT
GATCTTGCAG AAAATAGAGG AGACAAGATA GATATCTCAA AATTTGAAAA ATTGCTAGGT
GTTCCTGTAG TCAGGACAAC TGCAAACCAT GATTTAGGCA TTAACTCTCT TCTTGATGCA
GTCATTTCAA AATCCAGTTC TGAAACCCCT CACCCTCATG CGATAGATTA TGGGAAAAAA
ATTGAAGAGA AGATTCACAA AATTGAAAAA ATTTTGAATA AAGATAATGA CTTGACGAGT
AAGTATCCTT CCAGATGGTT AAGTATAAAA CTTCTTGAAG GAGATGAAAA TGTCCGCTCA
AAGCTATCCT CGTCAAGTAT ACATCTTGAA GTTGAAAAGT TTCTTTCCGA ACTTGATACT
GAAGAATATG AAGCCGAAAT GGCCGATAAG CGTTATGAAT TCATAAGTAA ACTGATATCT
CAGGTATCCA GTTCCCATGT AGATGAGATA TCCCCTTCGG ATATGGTTGA CAGAGTACTT
ACCAACAAAT ATCTTGGGAT TCCTATATTT CTCTCTCTGA TGTGGGGAAT GTTCGAATTA
ACCTTTAATT TTGCCACTCC TTTCATGGAA CTCATTGACA AGTTTTTCGG CATACTTGCC
GAAGTAGTTT CAGAAAGCAT TGGCTCCCCC TGGCTCTCAT CACTCCTTGG AAATGGAATA
ATATCAGGGG TCGGAGCAGT TCTGCTTTTT GTACCCAATA TTTTCATTCT GTTTTTCCTC
TTATCCCTTC TGGAAGACAG CGGATATCTT GCAAGAGCTG CTTTCATTAT GGACAGATTG
ATGTATTCGA TGGGAATCCA GGGAAAATCC TTTATCCCGA TGCTTATGGC ATTTGGGTGT
TCTGTTCCAG CCGTGATGGC AACCCGCACT CTCGAGGATG AGAAAGATCG TCTTATTACT
ATGCTGGTTA CACCTTTCAT ATCCTGTGGA GCCAGAATGC CTGTGTATGT GTTATTGGCA
GGGACATTTT TTGGAAGGCA GGCCGGATCA GTTATCTTTG GAATATATGT GCTTGGTATC
ATTATAGCAA TAGTATCTGC CAAGCTTTTT AGAACTGTGA TTTTCAAGGG AAAGCCGTCT
CCATTTATTA TGGAACTTCC TCCCTATCAC AAACCTTCTA TTGGCAACTC CTTCAAGTAT
ATGTGGAACC AGGGTTCCCT ATATCTCAAA AGAGTAGGTA CTGTAATCGT TGGGGGAGTA
GTGATTATCT GGTTATTTGC ATATTTCCCT CAGGGAGTTG AGTATGGAAG TGCAGAAAGT
TATGTTGGAA GTCTTGGTAG ACTCCTTGAA CCTCTAGTAT CTCCACTCGG CTTTGACTGG
AAAATAGCAG TTTCACTTAT ATTCGGATTT CTTGCTAAAG AAGTCGTCCT TGGGTCTCTT
GGAACACTTT ATGGAACAGG AGCAGATGAC GGGATGTTAT CTTCTGCTCT GATAGCAGAT
CCGATATTTA CACCTGCTGT TGCACTGGGG CTTATGGTGT TTACCTTACT TTACGTACCC
TGCATAGGAA CAGTTGCAGT AATAAAAAAA GAATCAGGTT CCTGGAAGTG GATGCTTTTT
TCAGTGGCTT ATTCTACAAC TGTAGCGTGG ATTATGGCTT TTGTAACAGT AAACATAGGG
ACTATTGTGC TTGCATAA
|
|---|
| Protein sequence | MIEKKIRVAL TGNPNVGKTT VFNAITGARQ KVGNWPGVTV EKKIGIKEYG DCVLEIVDLP
GTYSLTAYSA DEVVARNYIL EEKPDIVVQI LDSTNLERNL YLSTQLLEMD KNIILALNMT
DLAENRGDKI DISKFEKLLG VPVVRTTANH DLGINSLLDA VISKSSSETP HPHAIDYGKK
IEEKIHKIEK ILNKDNDLTS KYPSRWLSIK LLEGDENVRS KLSSSSIHLE VEKFLSELDT
EEYEAEMADK RYEFISKLIS QVSSSHVDEI SPSDMVDRVL TNKYLGIPIF LSLMWGMFEL
TFNFATPFME LIDKFFGILA EVVSESIGSP WLSSLLGNGI ISGVGAVLLF VPNIFILFFL
LSLLEDSGYL ARAAFIMDRL MYSMGIQGKS FIPMLMAFGC SVPAVMATRT LEDEKDRLIT
MLVTPFISCG ARMPVYVLLA GTFFGRQAGS VIFGIYVLGI IIAIVSAKLF RTVIFKGKPS
PFIMELPPYH KPSIGNSFKY MWNQGSLYLK RVGTVIVGGV VIIWLFAYFP QGVEYGSAES
YVGSLGRLLE PLVSPLGFDW KIAVSLIFGF LAKEVVLGSL GTLYGTGADD GMLSSALIAD
PIFTPAVALG LMVFTLLYVP CIGTVAVIKK ESGSWKWMLF SVAYSTTVAW IMAFVTVNIG
TIVLA
|
|---|
| |