Gene Mbar_A1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1439 
Symbol 
ID3626120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1772711 
End bp1773349 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content31% 
IMG OID637700328 
Productmethyltransferase 
Protein accessionYP_304977 
Protein GI73668962 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00779237 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAAAA TTCCCTCAAG TGTCAAATTG GACCCTATAA TTTATGAGTA TATAAAAAAA 
GATCATTTGA TTCTTGATAT CGGTTGTGGT TTTGGAAAAG TTTCCCTTCA ACTTGCTTTT
CAAGGTTTTT ATGTGGAAGG AATAGATATT AATGAAGCTG GAATACTTGC TGCACAGGAA
AGTGCAAGAA AACTAAACCT GGATGATAAA GCACATTTCA GAGTTGGAGA TGCTACAGAT
CTACCATATA TAGAAGATAA ATTTGACATT GTTATCATGC ATGGACTTTT GACCATTATT
GTGGATAAAA GTGATAGAAA CAAAATTATA CAGGAAGCTT ATAGGGTTCT AAAACCAGAA
GGGCATTTAT ATATTGTAGA CTTTGGTCAA ACATGGCATT CTGATATATA CAGAGAAAGA
TATCTGAAAG ATTTCCCTCT AACAAAGGAA GAAGGATCTT TTTTAGTTTA TAATAAAGAT
ACAGGGGAAA AAGAATACAT TGCACATCAT TATACCGAAA AAGAATTGAT TTTTCTTTTA
GTAAATAATG GATTCAAAAT AGATTCTTTT GAGACTAAAG AATTTGTTTC AAGATCGGGA
AATAAAGTAA ATGGGTTTGT TATAATATCA AAAATTTGA
 
Protein sequence
MTKIPSSVKL DPIIYEYIKK DHLILDIGCG FGKVSLQLAF QGFYVEGIDI NEAGILAAQE 
SARKLNLDDK AHFRVGDATD LPYIEDKFDI VIMHGLLTII VDKSDRNKII QEAYRVLKPE
GHLYIVDFGQ TWHSDIYRER YLKDFPLTKE EGSFLVYNKD TGEKEYIAHH YTEKELIFLL
VNNGFKIDSF ETKEFVSRSG NKVNGFVIIS KI