| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1435 |
|---|
| Symbol | |
|---|
| ID | 3626116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1766707 |
|---|
| End bp | 1767714 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637700325 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304974 |
|---|
| Protein GI | 73668959 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3391] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.61404 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA ACAAAAAACT GTGTTCAATA GCTTTAACTT CAATAGCCAT TGTTTTATTT
TTAATTTTGA CATTACCTAC TACATCGGCA GCTACTGAAC AAAATACTGC GAGTGCGGCT
AAATATGCCT ACATTACGAA TAGCGGCAGC ACCACTGTCT CTGTAATTGA CATCACAACA
AACAAGGTTA CAGCCAAGAT AAACGTAGGA AAACAGCCTT ACGGAGTTGC AGTAAACCCC
GCCGGAACTA AGGTATATGT ATCGAAAGAC AAAAGCGGCT CCGTCTCCGT AATTGACACC
GCAACAAACC AGGTTACAGC CACAGTGAAA GTAGGAAAAC ATCCATGGGG AGTTGCAGTT
AGCCCAGATG GAACAAGAGT ATATGTGGTA AATGAAGGCA GTAAGACCGT CTCTGTAATT
GACACTGAAA AAAATAAGGT TACAGCCACA GTAACTGTAG GAAAATATCC TTGTGGAGTT
GCAGTAAACC CAGAGGGAAC AAAAGTATAT GTGACGAACA CTCTCGCTAA CACCGTCTCT
GTTATTGACA CAGCAAAAAA TAAAGCTACA GCCACAATAA AGGTAGGAAA CCTCCCTACC
GGAGTTGCAG TTAATCCAGA GGGAACAAGA GTATATGTGA CAAATGAGTA CGATATTTCT
GTAATTGACA CAGCAAAAAA TAAAGTTACA GCCACAATAA AGGTAGGAAA ATACCCATGG
GGAGTTGCAG TAAACCCGGC TGGAACAAAG GTATATGTGG CGAACTATGG AGATGGTACT
ATTTCTGTAA TTAATACAGC CACAAACAAG GTTACAGATA CATCGAAGGT AGGAAGTTGT
CCTTTTGGGG TTGCTTTCAG TCCGGATGGA ACTAAAGCAT ATGTGGCGAA AGAAACAAGC
GGCGCTGTCT CGGTAATTAA CACAGCCACA AACAAGGCTA CAGCCAAAGT GTGGGTAGGA
AAAAAGCCTG TTGCATTCGG GCAGTTTATA GGTTCTGCCG CAATATAA
|
|---|
| Protein sequence | MKMNKKLCSI ALTSIAIVLF LILTLPTTSA ATEQNTASAA KYAYITNSGS TTVSVIDITT
NKVTAKINVG KQPYGVAVNP AGTKVYVSKD KSGSVSVIDT ATNQVTATVK VGKHPWGVAV
SPDGTRVYVV NEGSKTVSVI DTEKNKVTAT VTVGKYPCGV AVNPEGTKVY VTNTLANTVS
VIDTAKNKAT ATIKVGNLPT GVAVNPEGTR VYVTNEYDIS VIDTAKNKVT ATIKVGKYPW
GVAVNPAGTK VYVANYGDGT ISVINTATNK VTDTSKVGSC PFGVAFSPDG TKAYVAKETS
GAVSVINTAT NKATAKVWVG KKPVAFGQFI GSAAI
|
|---|
| |