| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1433 |
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| Symbol | |
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| ID | 3627470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1763538 |
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| End bp | 1764863 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637700323 |
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| Product | replication factor A |
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| Protein accession | YP_304972 |
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| Protein GI | 73668957 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.140732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAA AGATTGCGCC CCACCTTGAA GAGTTAACCA GGGCGCTTGG AAACCTTGAA
AATACTGGCG TCCGGGCAGA GTTTGAGAAA CTCATTGCTT TTCGTGTCCC ACCTGATGTC
GCAAAAGAGA GTATCCTCCG CAAGTTTGGA GGAAAAAGGA AAGTTTTGAA AGTAAAAGAT
CTGTCTGCCA ATCTTAAGAA TTTTGAGCTT ACAGGCAGGA TTCTGGACCT TGGGGAAAAA
TCAATTCGTC CGCAAGCAGG AGCTCAGGAA AAACCTTCCA GGCTTTATAC AGGGGTTCTT
GCGGACGAAA CAGGGGCAGT TCTGTTTTCT TCCTGGAAGG AACTGCCAGG TTCAATGGGG
GATGTGATTA ACATCAAAAA TGCCTATACC CGGATCTGGC AGAACCGGAT TAGGCTTTCT
ATAGGAGAAC AATCTCCGGT GTCGAAAATT TCGGACTCCT CACTTCCTCC CCTGTCCGAA
CTTTCAGCAA GCCAGAAAAA AAAGTTAATT GATATAGGAG CTGCAGATTT TTCTGTAGAT
ACAATAGCCT GCGTGCTTCA GCTTTCATAC AGAGAAATCT TTGTAAAGGG ACGCCAGTCC
AGAGTGATCT CAGGTGTGCT TGCAGATGAG ACCGGCAGGC TGCCTTTTAC AGCCTGGATT
GAACTGCCTG GCATTGATAT AGGGAGCATT ATACGAATTG AGGGAGCTCA GGTGCGTATG
TTTAGGGGAA TGCCATCAGT AAATATCCTG AGCAGCACAA AGGTTTCTTC GATCGGGTCG
GAAGAAGCCG GAAAACTTGC ATTTACCTTT GAATCTGCAG CAAAAGATCC GGCGCCTATC
AAAATTAGGG AGATAAATTC AAGAGACAGC CTGTTTGACG TGTCCGTAGC AGGTAACCTG
GTTTCAGTTA GGCCCGGTTC AGGCATTATC TCCCGATGCC CTGAATGCAG TCGTGTAATC
CAGAAAGGAA ACTGCAGGGT TCACGGGAAG GTCGAGGGCA TATGGGACAT GCGGATCAAA
GCCATACTGG ATGACGGAAC AGGTTCCGTG TCAGTTATGT TTCCAAGGGA ACTTGCAGAA
ATTATCTATG GAAAAACTCT TGAGGAAGCC GAACAGCTGA TGTTCTCGGA TGTCTCAAAA
GATGCAGTCT ATGAAGATTT AAGGCGTTTT CTTACGGGTC GTTATCTTGC AGTACGCGGG
AACTCTTCAA AAAATGAATT TGGGGTTTCT TTCGTAGCTG AAAATGCCTG GGTACCCGAA
GATGATCTTG CAGTAAGGGT AGTTGAACTC CTTCACAGGC TCGGGCCTGA TGAAGAGGAT
GGATAG
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| Protein sequence | MDEKIAPHLE ELTRALGNLE NTGVRAEFEK LIAFRVPPDV AKESILRKFG GKRKVLKVKD
LSANLKNFEL TGRILDLGEK SIRPQAGAQE KPSRLYTGVL ADETGAVLFS SWKELPGSMG
DVINIKNAYT RIWQNRIRLS IGEQSPVSKI SDSSLPPLSE LSASQKKKLI DIGAADFSVD
TIACVLQLSY REIFVKGRQS RVISGVLADE TGRLPFTAWI ELPGIDIGSI IRIEGAQVRM
FRGMPSVNIL SSTKVSSIGS EEAGKLAFTF ESAAKDPAPI KIREINSRDS LFDVSVAGNL
VSVRPGSGII SRCPECSRVI QKGNCRVHGK VEGIWDMRIK AILDDGTGSV SVMFPRELAE
IIYGKTLEEA EQLMFSDVSK DAVYEDLRRF LTGRYLAVRG NSSKNEFGVS FVAENAWVPE
DDLAVRVVEL LHRLGPDEED G
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