Gene Mbar_A1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1428 
Symbol 
ID3627465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1757226 
End bp1757645 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content46% 
IMG OID637700318 
Product50S ribosomal protein L18e 
Protein accessionYP_304967 
Protein GI73668952 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1727] Ribosomal protein L18E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0598114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAGA TATATACAAA TCTTGCGGAG GAACATACAT TGGGTAAAAA ATCACTGGTA 
AAACTGACAA GAAAAACAAA TCCAAGAATC GTTTCCCTGA TTCTTACCCT GAAAGAGAGG
GCAAATACAA ACACTGCCCC CATCTGGAAG GATATCGCGA GACGTCTTGA GATGCCGTCC
AGAAACTATG CGGCTGTGAA TTTGAGTAAG ATTAACAGGC ACACAGCAGA GGACGATGTT
CTGCTTATTC CGGGAAAAGT ACTGGGCGCA GGCCTTCTTG ACCACCCTGT AACTGTTGCG
GCTTTAACCT TCAGTGACTC TGCAGTTGAC AAGATCACTG AAGCTGGTGG CAAGTGCCTG
AGTCTCGAAG AGATAATGGA AGCAAATCCA AAAGGGTCCG GTATCCGGAT TTTCCGCTGA
 
Protein sequence
MSEIYTNLAE EHTLGKKSLV KLTRKTNPRI VSLILTLKER ANTNTAPIWK DIARRLEMPS 
RNYAAVNLSK INRHTAEDDV LLIPGKVLGA GLLDHPVTVA ALTFSDSAVD KITEAGGKCL
SLEEIMEANP KGSGIRIFR