| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1427 |
|---|
| Symbol | rpl13p |
|---|
| ID | 3627464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1756793 |
|---|
| End bp | 1757215 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637700317 |
|---|
| Product | 50S ribosomal protein L13P |
|---|
| Protein accession | YP_304966 |
|---|
| Protein GI | 73668951 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01077] ribosomal protein L13, archaeal/eukaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0334284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTA TCGATGCAAA TGGGCTTATA CTAGGGCGTC TTGCAAGTAC AGTTGCAAAA
CAGTTGCTTT CAGGAGACGA AGAAATATAT ATTGTAAACG CTGAAAAAGC CGTAATTTCT
GGCTCAAGGG CGACCACCCT CAAAGAATAC CGGGAAACCC GGGAGAGAGG TAGTACGGAA
TTCGGGCCTT ACTTCCCGAA GCGTCCGGAC CGCATCCTTA AGAGGACTAT CCGTGGCATG
CTACCTTATA AGAGAGCAAG AGGCAGAGAC GCAATGTCCA GGCTTAAGGT CTATGTAGGT
GTTCCCACCG AACTCAAGGA CACTGAAACA ATCACAATTG CAGATGCCGA TATGAGGCTT
TTAAGCTCAA GTAAATATAT TGAACTTGGT GAAGTGAGCC AGAAAATGGG TTCAAAATTT
TAA
|
|---|
| Protein sequence | MTVIDANGLI LGRLASTVAK QLLSGDEEIY IVNAEKAVIS GSRATTLKEY RETRERGSTE
FGPYFPKRPD RILKRTIRGM LPYKRARGRD AMSRLKVYVG VPTELKDTET ITIADADMRL
LSSSKYIELG EVSQKMGSKF
|
|---|
| |