Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1422 |
Symbol | |
ID | 3627458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1754129 |
End bp | 1754926 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637700311 |
Product | hypothetical protein |
Protein accession | YP_304961 |
Protein GI | 73668946 |
COG category | [R] General function prediction only |
COG ID | [COG1355] Predicted dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00741798 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGACAGC CAGCAGTTGC AGGGCAGTTC TATCCCCTGC GTCCTGATAA TCTGGAGAAA GAACTTAAGC AATGTTTTGA AGGTCTGGAG ATCCGGGAAA GGAATATCCT GGGAGCAGTG TGCCCACATG CAGGATATGT CTATTCAGGG AGAGTTGCTG CACACGTTTA TGCAGTTCTT CCCAAAGCCG ATACATATGT CCTTTTTGGC CCCAACCATA CGGGATATGG TTCACCGGTA TCAGTATCCA CAGATACCTG GAAAACTCCC CTGGGTATTA TCGAGGTCGA TCGAGAACTT GCCGAAGGAC TAACAGGAAG TATTGTTGAT GTGGATGAGA TTGGGCACCG ATATGAACAT TCGATCGAAG TTCAGCTTCC TTTCCTTCAA TACCGCTTTG ATCAGGATTT CAGAATTCTT CCTATTTGTC TGGGTATGCA GGATGAAGAG ACCGTAATTG AAGTGGGGAC TCTTATTGCC AACCTTGTTT CAAAAAGTGG AAAAAAAGTA GCTTTCATTG CATCCAGCGA TTTTACTCAT TATCAGCCTG CAAATCTTGC AAGGGAAACG GACAATGAAA TTATAGAAGC CATCCTTAAT CTGGATGTTC CTGGAATCTA TGAAAGGCTT TATAGAAGAA ATGCATCCGT ATGCGGATAT GGCCCTATTT CTGCGATGCT AACAGCCTCA AAAAAGCTTG GTGCAACTCG AGCTGAACTT CTTAACTATT CAAACAGTGG GGAGGTCTCC GGAGATATGA ACGCAGTTGT AGGATATGCC GCAATTATTG TGGAATAA
|
Protein sequence | MRQPAVAGQF YPLRPDNLEK ELKQCFEGLE IRERNILGAV CPHAGYVYSG RVAAHVYAVL PKADTYVLFG PNHTGYGSPV SVSTDTWKTP LGIIEVDREL AEGLTGSIVD VDEIGHRYEH SIEVQLPFLQ YRFDQDFRIL PICLGMQDEE TVIEVGTLIA NLVSKSGKKV AFIASSDFTH YQPANLARET DNEIIEAILN LDVPGIYERL YRRNASVCGY GPISAMLTAS KKLGATRAEL LNYSNSGEVS GDMNAVVGYA AIIVE
|
| |