Gene Mbar_A1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1422 
Symbol 
ID3627458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1754129 
End bp1754926 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content44% 
IMG OID637700311 
Producthypothetical protein 
Protein accessionYP_304961 
Protein GI73668946 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00741798 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGACAGC CAGCAGTTGC AGGGCAGTTC TATCCCCTGC GTCCTGATAA TCTGGAGAAA 
GAACTTAAGC AATGTTTTGA AGGTCTGGAG ATCCGGGAAA GGAATATCCT GGGAGCAGTG
TGCCCACATG CAGGATATGT CTATTCAGGG AGAGTTGCTG CACACGTTTA TGCAGTTCTT
CCCAAAGCCG ATACATATGT CCTTTTTGGC CCCAACCATA CGGGATATGG TTCACCGGTA
TCAGTATCCA CAGATACCTG GAAAACTCCC CTGGGTATTA TCGAGGTCGA TCGAGAACTT
GCCGAAGGAC TAACAGGAAG TATTGTTGAT GTGGATGAGA TTGGGCACCG ATATGAACAT
TCGATCGAAG TTCAGCTTCC TTTCCTTCAA TACCGCTTTG ATCAGGATTT CAGAATTCTT
CCTATTTGTC TGGGTATGCA GGATGAAGAG ACCGTAATTG AAGTGGGGAC TCTTATTGCC
AACCTTGTTT CAAAAAGTGG AAAAAAAGTA GCTTTCATTG CATCCAGCGA TTTTACTCAT
TATCAGCCTG CAAATCTTGC AAGGGAAACG GACAATGAAA TTATAGAAGC CATCCTTAAT
CTGGATGTTC CTGGAATCTA TGAAAGGCTT TATAGAAGAA ATGCATCCGT ATGCGGATAT
GGCCCTATTT CTGCGATGCT AACAGCCTCA AAAAAGCTTG GTGCAACTCG AGCTGAACTT
CTTAACTATT CAAACAGTGG GGAGGTCTCC GGAGATATGA ACGCAGTTGT AGGATATGCC
GCAATTATTG TGGAATAA
 
Protein sequence
MRQPAVAGQF YPLRPDNLEK ELKQCFEGLE IRERNILGAV CPHAGYVYSG RVAAHVYAVL 
PKADTYVLFG PNHTGYGSPV SVSTDTWKTP LGIIEVDREL AEGLTGSIVD VDEIGHRYEH
SIEVQLPFLQ YRFDQDFRIL PICLGMQDEE TVIEVGTLIA NLVSKSGKKV AFIASSDFTH
YQPANLARET DNEIIEAILN LDVPGIYERL YRRNASVCGY GPISAMLTAS KKLGATRAEL
LNYSNSGEVS GDMNAVVGYA AIIVE