| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1419 |
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| Symbol | |
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| ID | 3627455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1750942 |
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| End bp | 1752039 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637700308 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_304958 |
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| Protein GI | 73668943 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.501382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00657817 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAGTA CGACCTCAAA GCGAAAGATC GAACATTTGA AATTGTGTGC TGAAAGCCCG
GTTGAATCCC GAAAAGTCAG CGCGGGCTTT GAGGATGTGA CCCTGATCCA CAGGGCACTT
CCAGAACTCG ATATGGATAA ACTGAACCTG TCTATAGACT TTCTTGGAAA ACGCCTGCAA
GCTCCCTTTC TGATCGCTTC AATTACTGGA GGTCACCCTG ACACTACTCC TGTAAATGCT
GCACTTGCCG CTGCAGCTGA AGAGCTGGGG ATAGGAATGG GAGTTGGAAG CCAGAGAGCT
GCAATTGATG ACCCTACCCA GGAAGAGTCT TTCAGGGTTG TCAGGGAAAA AGCTCCGACT
GCTTTTATAT ACGGAAATGT AGGTGCTGCC CAGATTCGTC AGTATGGGGT TGATGGAGTT
GAGAAACTCA TAGAAATGAT CGACGCAGAC GCCCTTGCTA TTCACCTTAA TTTCTTACAG
GAAGCTATTC AGCCAGAAGG AGATAGGGAT GCCACAGGCT GCCTTGACAT GATAAAAGAA
ATCTGCTCCG TACTGGGCAA GCCAGTAATT ATTAAAGAAA CAGGAGCCGG GATCTCAAGG
GAAGATTCAA TTCTCCTCCA GAAAGCAGGC GTTTCTGCAA TTGATGTCGG AGGTGCTGGA
GGCACAAGCT GGGCAGGCGT CGAGGTCTAC CGAGCCAGGA AAAGTGGAGA TTATGCCTCC
GAACACCTTG GGGAACTTTT CTGGGACTTT GGAATTCCCA CGGTTGCCAG CATTATAGAG
TCCAGGGTCT CCCTGCCAAT TATCGCAACC GGCGGTATCA GAACAGGAAT AGATATCGCA
AAATCCATTG CTCTCGGAGC CAGTGCGGCA AGTGCAGCCC TGCCTTTTGT AGGTCCTGCC
CTTGAAGGAA AAGAATCAGT TGTCAGAGTC CTTTCCCGCA TGCTGGATGA ATTCAGGATT
GCGATGTTTC TCTGCGGCTG TGCAAACATA CAGGACCTGC GTAATGCACC TGTAGTTGTT
ACTGGCTGGA CTCTTGAATA TTTGGGGCAG CGTGGCTTTA ACGTAAAAGA CTATGCCATA
GCAGGAGACT CGTTCTGA
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| Protein sequence | MISTTSKRKI EHLKLCAESP VESRKVSAGF EDVTLIHRAL PELDMDKLNL SIDFLGKRLQ
APFLIASITG GHPDTTPVNA ALAAAAEELG IGMGVGSQRA AIDDPTQEES FRVVREKAPT
AFIYGNVGAA QIRQYGVDGV EKLIEMIDAD ALAIHLNFLQ EAIQPEGDRD ATGCLDMIKE
ICSVLGKPVI IKETGAGISR EDSILLQKAG VSAIDVGGAG GTSWAGVEVY RARKSGDYAS
EHLGELFWDF GIPTVASIIE SRVSLPIIAT GGIRTGIDIA KSIALGASAA SAALPFVGPA
LEGKESVVRV LSRMLDEFRI AMFLCGCANI QDLRNAPVVV TGWTLEYLGQ RGFNVKDYAI
AGDSF
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