Gene Mbar_A1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1414 
Symbol 
ID3627059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1742310 
End bp1742954 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content36% 
IMG OID637700303 
Producthypothetical protein 
Protein accessionYP_304953 
Protein GI73668938 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00470799 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0153029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATTT TTGACCTCCA TCTTCACTCA AAATATTCAT CGGATGGTAT CTTGGACCCT 
AAAACAATCA CAAAAGTCGC AATAAGAAGG GGGCTCAACG GAATTGCTAT AACTGACCAT
AACACAATAA AAGGAGGATT AAAAGCAAAA GAGTACGAAA CCAAAAATTT CAAAGTGATC
ATTGGTTCTG AAATTATGAC TAATAATGGA GAAGTTATTG GTTTATTTCT TTCAGAAGAA
ATTAGATCTA CAGATCTAAT AGAAGTAATC TCAACAATCA AAGCTCAAAA TGGCATAGTA
GTTATCCCTC ACCCCTTCGA CAAAATGAGG CACTCTGCCC TGTACCCTAC TGATGAAGAA
GCTCATTTAA TCGACTGTAT AGAAGGCTTT AATTCCAGAT GTATTTTCCA AAAGTACAAT
GATAAAGCTG TTGAATATGC TAATAAACAT AACTTACCAC TTGTCGCTGG AAGCGATGCC
CATTTTGCAA ATGAAATCGG AAATGCGGGA ATCGTTACCC AGAGTGAAGA TTTGCAAGAC
GCGATAATTA AAAATAACAT TGAGATATTC GGAAGCCGAT CAATGCTTAT TAACCATGCT
TTTACCAAGG GACTGAAAAG ATGGCGAAAA ATAAGATATG GATGA
 
Protein sequence
MFIFDLHLHS KYSSDGILDP KTITKVAIRR GLNGIAITDH NTIKGGLKAK EYETKNFKVI 
IGSEIMTNNG EVIGLFLSEE IRSTDLIEVI STIKAQNGIV VIPHPFDKMR HSALYPTDEE
AHLIDCIEGF NSRCIFQKYN DKAVEYANKH NLPLVAGSDA HFANEIGNAG IVTQSEDLQD
AIIKNNIEIF GSRSMLINHA FTKGLKRWRK IRYG