Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1414 |
Symbol | |
ID | 3627059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1742310 |
End bp | 1742954 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637700303 |
Product | hypothetical protein |
Protein accession | YP_304953 |
Protein GI | 73668938 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00470799 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0153029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTATTT TTGACCTCCA TCTTCACTCA AAATATTCAT CGGATGGTAT CTTGGACCCT AAAACAATCA CAAAAGTCGC AATAAGAAGG GGGCTCAACG GAATTGCTAT AACTGACCAT AACACAATAA AAGGAGGATT AAAAGCAAAA GAGTACGAAA CCAAAAATTT CAAAGTGATC ATTGGTTCTG AAATTATGAC TAATAATGGA GAAGTTATTG GTTTATTTCT TTCAGAAGAA ATTAGATCTA CAGATCTAAT AGAAGTAATC TCAACAATCA AAGCTCAAAA TGGCATAGTA GTTATCCCTC ACCCCTTCGA CAAAATGAGG CACTCTGCCC TGTACCCTAC TGATGAAGAA GCTCATTTAA TCGACTGTAT AGAAGGCTTT AATTCCAGAT GTATTTTCCA AAAGTACAAT GATAAAGCTG TTGAATATGC TAATAAACAT AACTTACCAC TTGTCGCTGG AAGCGATGCC CATTTTGCAA ATGAAATCGG AAATGCGGGA ATCGTTACCC AGAGTGAAGA TTTGCAAGAC GCGATAATTA AAAATAACAT TGAGATATTC GGAAGCCGAT CAATGCTTAT TAACCATGCT TTTACCAAGG GACTGAAAAG ATGGCGAAAA ATAAGATATG GATGA
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Protein sequence | MFIFDLHLHS KYSSDGILDP KTITKVAIRR GLNGIAITDH NTIKGGLKAK EYETKNFKVI IGSEIMTNNG EVIGLFLSEE IRSTDLIEVI STIKAQNGIV VIPHPFDKMR HSALYPTDEE AHLIDCIEGF NSRCIFQKYN DKAVEYANKH NLPLVAGSDA HFANEIGNAG IVTQSEDLQD AIIKNNIEIF GSRSMLINHA FTKGLKRWRK IRYG
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