Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1410 |
Symbol | |
ID | 3627055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1738858 |
End bp | 1739298 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637700299 |
Product | transposase |
Protein accession | YP_304949 |
Protein GI | 73668934 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3335] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0176947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.221999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAA ATACTGATTA TATAAAGGCA AATGCATTTG CCTTTTATTC ACTTAATGGA AATAATCTTA TTGAATTCAA GAATTGTTCA AAGGCAGAAA ACGTATGTGA ATTTCTGGAA AAAATAGTGG AAAAAAACAA AGGAAAAATA GTTGTGCTTA TACTTGACAA TTCAAAAACA CATCACTCAA TAAAAACAGT AACAAAAGCC AAAGAATTAG GGATTATACT TGTGTTTCTA CCACCATATT CACCAGATCT AAATCCTGTA GAATATGTAT GGAAAACGAT AAAAAGAAAA GTATCTGTAA CATTTGTTCA ATCTAAAGAA CATTTAAGAA ACATAATCAA AAACGAGTTT ATTAGAATAG AAAACTCATT GTCATTTGCA AAGAGATGGA TGGAAACTTT CCATCAGCAA ATAAAAAGTG TAATTTGTTA A
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Protein sequence | MIKNTDYIKA NAFAFYSLNG NNLIEFKNCS KAENVCEFLE KIVEKNKGKI VVLILDNSKT HHSIKTVTKA KELGIILVFL PPYSPDLNPV EYVWKTIKRK VSVTFVQSKE HLRNIIKNEF IRIENSLSFA KRWMETFHQQ IKSVIC
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