Gene Mbar_A1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1409 
Symbol 
ID3627054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1738262 
End bp1738615 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content34% 
IMG OID637700298 
Producttransposase 
Protein accessionYP_304948 
Protein GI73668933 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0706153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.214675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGGA AGGAACAAAT TATCATTGAT AGAAAGGTAA CTGTTGATGA ACTTAACTCC 
TTGATTACTC ATGAAAAGAA CTCTAGAGTG CTTAAAAAAC TTTATTTTGT CAAATTCAGA
TATTTAGGAG ATTCTGTTGA AGAAGCTGCT ATTAAACTTG GAGTTACTAA GAAAACAGGA
TATTATTGGC AGGAAGATTG GAACAAAGGC GGCTACACCG CCTTAATGCC ACAATTTTGT
GGGGGAAGAA GATCTAAACT TACCGATGAA CAAATGATAA AATTAAGGAA TTTACTGAAT
GAGAAGGATT ATTGGTACCA GAGAAGTTTT GGAATTAATA AAGGAAAAAT ATGA
 
Protein sequence
MVGKEQIIID RKVTVDELNS LITHEKNSRV LKKLYFVKFR YLGDSVEEAA IKLGVTKKTG 
YYWQEDWNKG GYTALMPQFC GGRRSKLTDE QMIKLRNLLN EKDYWYQRSF GINKGKI