| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1407 |
|---|
| Symbol | |
|---|
| ID | 3627052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1735187 |
|---|
| End bp | 1736431 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637700296 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_304946 |
|---|
| Protein GI | 73668931 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.31889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.364163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGGGG AAATAAACAA AGCTTGTGGT ATAGACATTC ACAAAATTTT TGTCATTGCT
ACTATTCTCA GCAGATCTGG GGAAAAACAG CTACAGCGTT TTGAGAGAGA TGATGAGGGA
ATTTTATCCC TTAAAAATTG GGTAACATCA GAAAAATGTG ATGTTGTTGC TTGTGAATCA
ACAAGTGACT TCTGGGTTCC AATCTATGAA TCATTGATAG ATCATCTGCC TGTTATAGTT
GGAAATGCTC GAGATATGAA AGCATTTACA CACAAAAAAA CAGATAAGAT AGATTCAGAA
TTCATTGCAC AACTTGCATT GAATAATATG ATTCAGCCAT CAAGAGTTTT CCCAAAGAGG
CACAGAGAAT TCAGGTCATA TGTTCGGCTC AGGTTAACTC TTGTAAGGAA AAGAACAGAT
ATAAAAAATG AAGCTCATGC AATTCTATCT TCTGAAATGC TACGTCTAGG TGACGTACTG
ACAGACATTT TTGGAAAAAA TGGTAGAGCA ATTCTGTCAG GAATTGCTTC AGGTAAAAAT
GTTGATCAGA TTATAGAAAG CCTTTCTCCA AATGTTCGGA AAAAAACTGC TCAGATAAGA
GAGATTCTGG ACAGAGAAAT CTCTCAGAGT GCTGCAATCA GACTTCAGAT CTGTCTAAAT
CTCATAAAAC ATCTGGATGA TGAAATTGAA ACTCTGGAAA GAGAAATTTT CAATTATGCT
TATCAAAAGC ATAAAAGAGA AATGGAAATT TTAATGTCAG TTCCAGGTAT TGGAGAACTT
GGTGCAGCAA CTCTTATTGC TGAAATAGGA AATTTTAGTG ATTTTCCATC GGGAGATAAA
CTTGCTTCAT GGCTTGGAAT AGTTCCGAAT GTGTATCAAT CTGCAGATAA ATACCACAAC
GGTAGAATCA CTAAAAGAGG ATCAAAAGTA GTAAGATGGA TTCTAACCCA GATTGCTCAA
GCAGCAGCAA GAAAGAAAAA TAGCAGGTTA AAAGAGTTTT TTAACAGGAA AAAGAAGTCA
ATTGGATATG CCAAGGCAAT TATTGCCTTG GCAAAGAAAA TTGCAACGAT AATATGGCAT
CTTATCATAA ATGATGAGAT GTATGAAGAT GAGACCGGGT ACGAAAAAGG AGAAGTTAAA
AAGAGGAAGA TTGTTGAGAC CGAGATATTT TCCGTTGATG AACGAATAAA AATAATGAGT
GAAATATTTG CAATAACGGA AAAACAGAAT GAAGAGAGCA CGTGA
|
|---|
| Protein sequence | MEGEINKACG IDIHKIFVIA TILSRSGEKQ LQRFERDDEG ILSLKNWVTS EKCDVVACES
TSDFWVPIYE SLIDHLPVIV GNARDMKAFT HKKTDKIDSE FIAQLALNNM IQPSRVFPKR
HREFRSYVRL RLTLVRKRTD IKNEAHAILS SEMLRLGDVL TDIFGKNGRA ILSGIASGKN
VDQIIESLSP NVRKKTAQIR EILDREISQS AAIRLQICLN LIKHLDDEIE TLEREIFNYA
YQKHKREMEI LMSVPGIGEL GAATLIAEIG NFSDFPSGDK LASWLGIVPN VYQSADKYHN
GRITKRGSKV VRWILTQIAQ AAARKKNSRL KEFFNRKKKS IGYAKAIIAL AKKIATIIWH
LIINDEMYED ETGYEKGEVK KRKIVETEIF SVDERIKIMS EIFAITEKQN EEST
|
|---|
| |