Gene Mbar_A1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1390 
Symbol 
ID3626416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1713648 
End bp1714181 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID637700279 
Producthypothetical protein 
Protein accessionYP_304930 
Protein GI73668915 
COG category[S] Function unknown 
COG ID[COG3430] Uncharacterized protein conserved in archaea 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCA AGAAATTGTT TAGAAAAGAT GATAAAGCAG TTTCCCCGGT TATCGGTGTC 
ATTTTGATGG TTGCAATAAC CGTCATCCTC GCCGCCGCAA TCGGATCTTC CGTATTTGGC
CAGGGAACTA CTGAATCTGC ACCGCAGGCG AACCTTGATA TTAAAGCAAG TCATATCCCT
GATAATGCAT TCGATGCGCC ATCTATAAAA ATTGAGCACC TTGGTGGAGA TGCGGTTCAC
TTCGAGGATT CCACAATAAC AAAAGTTATG GCATCTGTTA ATGGTGGCAC ATCCGTTGAA
ATTAATGCTG ATGGTCTTGG AACTGATGAT ATTACTACTG ATGACGATGG TCTTGGAACT
ATGAACGTTG GTGATATAAA GATACTAGAA TTGATAACAG TTTCTGATGA TACGCCACTT
CAAGACAGCA CAGGTGAGAC AGATCACGCA ATAGTTTCTG GTGATACTGT CAATATCAAA
GTCATCGATG TGCAGACCAA TCAGCTTATC TGCGACAAGG ATATAAGGTT CTAA
 
Protein sequence
MDFKKLFRKD DKAVSPVIGV ILMVAITVIL AAAIGSSVFG QGTTESAPQA NLDIKASHIP 
DNAFDAPSIK IEHLGGDAVH FEDSTITKVM ASVNGGTSVE INADGLGTDD ITTDDDGLGT
MNVGDIKILE LITVSDDTPL QDSTGETDHA IVSGDTVNIK VIDVQTNQLI CDKDIRF