Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1366 |
Symbol | |
ID | 3627400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1684677 |
End bp | 1687154 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637700256 |
Product | hypothetical protein |
Protein accession | YP_304907 |
Protein GI | 73668892 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATAG GTCCTACAAC GTACTTTGGG AAAGAGAGAG TATTTGTTGA TAGGGAAGCC TGCATTCAGG CTTTCAGAGA AAATATCCAG AATTCGGAAA TCAAAGAATA CAATGTCTTA TTTTATTACG GAATTGCTGG AATTGGTAAA AGCAAATTGC AAGAAGAGTT GCAAAAGATA CTGAAGGAAG AGTACCCTGA AATATTTTGG GCATCAATAG ATCTTGACGT AAAAACTTAC AGGGATATAG GTACCTTCCT CATAACTTTA CGAAACAAAA TTCAAGAAGA GCATAGTGCG AAGTTTCACC TTTTTAATGC TGTTCATGCT ATTTATTGGA AAAAGCTTCA CCCGGAAATT CCTCTCCAAA AACAGAATTA TCCTCTAATC GAGAAAGGAG ATATTTTAGA TAAAATAATA GGTGTCCTTG AGAACTCTAG TAAACTTTCA TTAGCTTGGG AACTATTGAA CAGCGCTTCA GACAGTTTTA GAAAATGGTG CCACTTACAT CATATCGATG TTTCCAAAAT TGAATCATTA GAGCCAAATA AGATAGAAGA ACTACTACCA GGAATTTTTG CCGCTGATTT TTTTGAACAC TTTGGGGAAA ACTCGAAATT CTACATCTTT ATTGATACTT ACGAAGCTCT CTGGGATGGT CTGAGGGATA AAGGAAGTTT CCATGAAAAA GATAAATGGA TAAGGGATAA CCTTATTCCA AATATGCTTG GTGTTTCATG GGTTATATGT GGGCGAGAAA AATTGCTATG GTTTCCTGAA TGTGATTCTG ATTGGGATAT GTATCTGGAA CAGCACTCAG TAGATGAACT TCCAGAAAGC TATTGTACAA AATTTTTGGA AGATTGCGGT ATTGAAAACA AAGATATTCG AGATCTAATT ATCAAAGCCA GCGAAGGAGT TCCGTATTAC CTTAACCTGT CCGTTGATAC TTTTGAAAAG ATAAACAAGA AAAGACAGCC GGTTTCTAAA TATTTCGGAA AAACACAGCC AGAAATTTTC AACATATTTG TGAAATACCT AGACCACAAT GAGATTCGAG CACTTGAAGT ACTCTCAGCA CCTAATTTCT GGGATCGAGA TCTATTTGAA ATATTGATGA AAAAGTTTGA TCCAGGATAT CCAACTGGTG CCTTTTCAAA ACTGATTAAG TTTTCTTTTA TCAAAACCGA TTCCAATGAG AAATATTCGA TTCATCAGTT GATGAGGAAA AGCCTCCAAG AACATCAAGA TTCTACTGAT AGAAAAAGTA CTCATCAATT TTTGCTTGCT TACTACAGTG ACAAAATAGA AGAACTTGAT ATTAAGGCTA TAACCCCAGA ACACGAAATA GCCCTAACCG AAGCCTTCTA CCATGCAAAA GAATCACTTG AAGCAGAAAA ATTATGCGAA TGGTTTATTT CTGTATCTGA TTCGTTCAAC AGAGCAGCAT TCTGGCAATT AATTACCCCT ATGTATGAAG AAATGCTGCA AATTCTGAAA ACAAAGCTAG GAAACGAACA TCCGGATGTT GCAACAACCC TAAACAACCT CGCAGGACTT TATTATCATA TGGGCGCTTA CGACAAAGCA CTTCCACTTT ATCAAAGGGC GCTTGAAATC TATAAAGAGG TGCCGGAATC TGAACACCCA GATGTTGCAA ATTCACTAAA CAATCTCGCA GAACTCTACC GTCGTATGGG CGCTTACGAC AAAGCACTCC CACTTTATCA AAGGGCACTT GGTATTCGTG AAAACATTCT AGGTTCCCAA CACCTAGATG TTGCAAATTC ACTAAACAAT TTCGCAGTGC TCTATGAAAG TATGGGAGAA TACGACAAAG CACTCCCACT TTATCAAAGG GCACTTGGTA TTCGTGAAAA TGTTTTAGGT TTCCAACACC CGTCTGTTGC AACAACCCTA GACAATCTTG CAGTACTCTA TTATCGTATG GGCGCTTACG ACAAAGCACT CCCACTTTAT CAAAGGGCAC TTGAAATCTA TGAAAAGGTT CTGGGTTCAG ACCACCCTGA TGTTGCAACA ACCCTAAACA ATCTCGCAGA ACTCTATCAT CATACGGGAG CTTATGAAAA ATCACTCCCA CTTTTTCAAA GAGCATTAGA AATAGTCGAA AAGACACTGG GACCTGAACA TCCAGATGTC GCTACAATCC TAAACAACCT CGCAGGACTC CATGAAAGTA TGGGAGAATA CAACAAAGCA CTCCCACTTT ATCAAAGAGC ACTTGACACT CGTGAAAAGG TGCTTGATCC GCAACACCCA TCTGTTGCAA CAACACTAAA CAATCTCGCA GGACTCTATC GTCAGATGGG AGAATACGAA AAAGCACTCC CACTTTCTCA AAGGGCACTT GAAATAATAG AAAAGAAATT GGAACCGAAG CATCCTAATA CAGTAACAAT AAAAAACAAT TATAATTTCC TTCTTTCAGA GATGAGTGAA GGAGATGAAG AAAAATGA
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Protein sequence | MPIGPTTYFG KERVFVDREA CIQAFRENIQ NSEIKEYNVL FYYGIAGIGK SKLQEELQKI LKEEYPEIFW ASIDLDVKTY RDIGTFLITL RNKIQEEHSA KFHLFNAVHA IYWKKLHPEI PLQKQNYPLI EKGDILDKII GVLENSSKLS LAWELLNSAS DSFRKWCHLH HIDVSKIESL EPNKIEELLP GIFAADFFEH FGENSKFYIF IDTYEALWDG LRDKGSFHEK DKWIRDNLIP NMLGVSWVIC GREKLLWFPE CDSDWDMYLE QHSVDELPES YCTKFLEDCG IENKDIRDLI IKASEGVPYY LNLSVDTFEK INKKRQPVSK YFGKTQPEIF NIFVKYLDHN EIRALEVLSA PNFWDRDLFE ILMKKFDPGY PTGAFSKLIK FSFIKTDSNE KYSIHQLMRK SLQEHQDSTD RKSTHQFLLA YYSDKIEELD IKAITPEHEI ALTEAFYHAK ESLEAEKLCE WFISVSDSFN RAAFWQLITP MYEEMLQILK TKLGNEHPDV ATTLNNLAGL YYHMGAYDKA LPLYQRALEI YKEVPESEHP DVANSLNNLA ELYRRMGAYD KALPLYQRAL GIRENILGSQ HLDVANSLNN FAVLYESMGE YDKALPLYQR ALGIRENVLG FQHPSVATTL DNLAVLYYRM GAYDKALPLY QRALEIYEKV LGSDHPDVAT TLNNLAELYH HTGAYEKSLP LFQRALEIVE KTLGPEHPDV ATILNNLAGL HESMGEYNKA LPLYQRALDT REKVLDPQHP SVATTLNNLA GLYRQMGEYE KALPLSQRAL EIIEKKLEPK HPNTVTIKNN YNFLLSEMSE GDEEK
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