| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1339 |
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| Symbol | |
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| ID | 3627451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1650601 |
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| End bp | 1651728 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637700230 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_304881 |
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| Protein GI | 73668866 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGT ATAAGATTCC GGTCCTCCCG GGCGACGGGA TAGGCCCAGA AATTATCGCC
GAAGGCAGAA AGGTAATAGA TGCCGCTGGC GAAAGATTCG GTTTTGATGT AGAGTGGATT
GAATACCCGC AGGGAGCAGA TCATTATCTT GAAACGGGAG AACTGATTTC GGAAGATACC
TTAAAGGAGC TATCCGGATA CCCTGCCATT TACCTTGGTT CCATCGGAGA TCCAAGGATT
GCCCCTGGCG TCCTTGAGAA GGGAATCTTA TTAACTGCAC GCTTTTATTT TGACGAGTAT
GTTAACCTTC GCCCGATAAA ACTTCTTGAT GGGGTGTGGA CCCCTCTCAA AGACAAAACC
TCGAAAGATA TCGATTTTGT GGTTGTCAGG GAAAACACCG AGGACTTCTA CGTAGGGGTC
GGCGGTAGAG CAAAAAAAGG AGCGAGCAAA GACCTTCTTG AAGTAAAAAG AACGCTCTAC
TCTGCAAAAT TCGGTCTTGA TATCGAGACT GACAGCGAAG AAATAGGATA CCAGATAGGC
CTTATCTCCA AGGAAGGTAC AGACAGGGTT ATCGAGTACG CCTTTGACCT TGCCGAGAAC
CGGAGAAAAC ACGTTTCTTC CGTTGACAAG GCAAATGTGC TTTCCGATAT CTACGGCTTC
TGGAGAGAAG AGTTCAATGC AATTTCTGCA AAACATCCCG GCGTTACTAC AGACTTTAAT
TTCGTTGATG CCGTCACAAT GTGGTTTGTG AAAAACCCCG AATGGTTCGA TGTGGTTGTA
ACCCCGAACA TGTTCGGAGA CATTATTACT GATCTCGGAG CCATGATCCA GGGTGGCCTT
GGCCTTGCTC CCGGTGGAAA CATCAACCCG ACAGGCACGA GCATGTTCGA GCCGATTCAC
GGTTCAGCTC CGAAGTACAA GGGACAGAAC AAAGTCAACC CGATTGCCAC AATCTGGGCA
GGTGCAATGC TCATAGAACA TCTCGGAGAA AAAGAAGCCG CAGACACCAT AGTTAATGCA
ATCCAGAAAA ACATTCTGGA CAGCAAAGTA AAAACCTATG ACATGGGTGG CAAGAGCACA
ACCTCAGATG TCGGAGACGA CATTGCAAGG ATAATAAAGG GAGAATAA
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| Protein sequence | MTQYKIPVLP GDGIGPEIIA EGRKVIDAAG ERFGFDVEWI EYPQGADHYL ETGELISEDT
LKELSGYPAI YLGSIGDPRI APGVLEKGIL LTARFYFDEY VNLRPIKLLD GVWTPLKDKT
SKDIDFVVVR ENTEDFYVGV GGRAKKGASK DLLEVKRTLY SAKFGLDIET DSEEIGYQIG
LISKEGTDRV IEYAFDLAEN RRKHVSSVDK ANVLSDIYGF WREEFNAISA KHPGVTTDFN
FVDAVTMWFV KNPEWFDVVV TPNMFGDIIT DLGAMIQGGL GLAPGGNINP TGTSMFEPIH
GSAPKYKGQN KVNPIATIWA GAMLIEHLGE KEAADTIVNA IQKNILDSKV KTYDMGGKST
TSDVGDDIAR IIKGE
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