| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1311 |
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| Symbol | |
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| ID | 3627626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1619431 |
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| End bp | 1620168 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637700201 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_304854 |
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| Protein GI | 73668839 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.281065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTTTTTG AAGTAATTCC TGCAGTGGAT ATGAGGGGTG GAAAATGCGT TCAGCTTGTG
CAGGGAGTGC CTGGCAGTGA GATTGTATCC ATTGACGATC CTGTTGAAGT TGCCCTTGAT
TGGGTCAGAA AAGGGGCAAA GACTTTGCAC CTGGTAGATC TGGACGGAGC AATTGAAGGA
GAGCGTAAAA ACGCTCCTAT AATCGAAAAA ATAGTAAGTG CATGCCAAAA AAAAGGGGTG
CAGATTCAGG TTGGAGGAGG CATTCGGAGT TTTGAGGATG CAGCTTCTCT GCTTGAACTG
GGAGTCTCGA GGGTAATTCT AGGAACTGCT GCACTCAAGA ACCCGGAACT TGTACAGCAG
CTCTCCAGTA CCTTTGGAAA CGAACATGTA ACTGTTGCCC TTGATGCAAA AAACGGAAAA
ATATCCATCA AAGGCTGGAC TGAGGAATGC GCACAAACTC CTGTAGAAAT GGGCAGGAAG
TTTGAAGAGC TCGGGGCAGG CAGCCTGCTT TTTACAAATA TAGACACCGA AGGCCTTATG
CAGGGAGTAA ATCCTGTCCC TACAAAAAAC CTTGTGGAAT CTGTCAGCAT TCCTGTAATC
GCATCTGGAG GAGTAAGTTC TCTTCAAGAC CTACGGACCC TGAAGAAAAC CGGAGCATCA
GGGGTTGTGG TAGGCAGCGC TCTATACACA GGCAGGTTCA CACTTGAAGC TGCGATTGAA
ACAACCCAGC AGGAGTGA
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| Protein sequence | MVFEVIPAVD MRGGKCVQLV QGVPGSEIVS IDDPVEVALD WVRKGAKTLH LVDLDGAIEG
ERKNAPIIEK IVSACQKKGV QIQVGGGIRS FEDAASLLEL GVSRVILGTA ALKNPELVQQ
LSSTFGNEHV TVALDAKNGK ISIKGWTEEC AQTPVEMGRK FEELGAGSLL FTNIDTEGLM
QGVNPVPTKN LVESVSIPVI ASGGVSSLQD LRTLKKTGAS GVVVGSALYT GRFTLEAAIE
TTQQE
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