Gene Mbar_A1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1303 
Symbol 
ID3627712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1612744 
End bp1613652 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content44% 
IMG OID637700193 
Producthypothetical protein 
Protein accessionYP_304846 
Protein GI73668831 
COG category[S] Function unknown 
COG ID[COG2014] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.432308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAA CAGAATCTTC CGAAAAAAGA AAATTCCCGG TAAATGAAGA AAAAAAGTAC 
AAAAATGGAC TGAAAGGGAA AGGAAAAACA GGAGAAGCAA ATAAAATGGA AGGAAATAAA
GAAGAAACTG GAATTTTGCC CTCCCTGGTT AATTCCCTCA AAAATGATCT GGGTCCTGCT
CTTAAGGACA TAGAAGTAAA GGATGTCAGG ATAGGGCTCG CCTATACCGG AGTTATGATT
TCCGAAAACT ATGGAGGCGT TGCCTGCACC CCGCTTTACG AGTTTTCAGG CTGTCCTACT
CTCGGGTTTG CGGGCTCTCT GAAAGGTAAA ACTGCGGATA AAGTTCTTGA ACTTGCCCTG
TCCAAAAATC CTCTTGAAGC CTCAGTCGGA GTTGCAACTG CAAATGCTCT TTCTCACATG
CTGCGAGATA TTAAACCTGA AAATTTCCCG GCATCAAACA TAGATATCCT TGACCTCATA
AAACCCGAAG ACAGAGTTGC AATGGTAGGA TATTTCGCTC CCCTTGTCCC TAAAATCCTG
AAAATAACAA ATAAGCTTAC GATCCTCGAA AAGCGTGAAA TCGAATCTCC GAAAACCCTG
ACTCTGCCCT CGGAAAAAGC CAGAGAAGTT CTCCCCACAT CGGATGTAAT CATTCTCAGT
GCAAGTACTC TTGCCAACAG GACTTTTGAT GAACTACTGT CCCTGCGGGG TGCAGCAAGG
GAAGTTGTCC TGCTAGGCCC AAGCTCTCCT CTTTACCCTG CCCCGTTTTT TGAGAGAGGA
ATTACTGCAG TAATGGGAAC CCAGATTCTT GATCCTATAA CTATGCTTAC CATTGTCAGC
GAAGCAGGAG GTACGAAAAA AATTCACAAG TGCTGCGGGG AAAAGGTAGC ATTTAGAAAA
AATAAATAA
 
Protein sequence
MPETESSEKR KFPVNEEKKY KNGLKGKGKT GEANKMEGNK EETGILPSLV NSLKNDLGPA 
LKDIEVKDVR IGLAYTGVMI SENYGGVACT PLYEFSGCPT LGFAGSLKGK TADKVLELAL
SKNPLEASVG VATANALSHM LRDIKPENFP ASNIDILDLI KPEDRVAMVG YFAPLVPKIL
KITNKLTILE KREIESPKTL TLPSEKAREV LPTSDVIILS ASTLANRTFD ELLSLRGAAR
EVVLLGPSSP LYPAPFFERG ITAVMGTQIL DPITMLTIVS EAGGTKKIHK CCGEKVAFRK
NK