Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1300 |
Symbol | |
ID | 3627709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1609779 |
End bp | 1610780 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637700190 |
Product | hypothetical protein |
Protein accession | YP_304843 |
Protein GI | 73668828 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.11265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.297989 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAA GAAGGAATAT TTGCAAATGG CTAATGTTTA TTATTTGTGT TTCTCTCTTT TTATGTGGTT CTGCAAGTGC AAATGATAAC GAATTTAACG ATTCCAAATC TAATAAGATC TCTGAGCCTT CTATAAAGGA ATTTGAAAAT GATCCCTCGT TCATAGCATA CAGAGGAACC TTACCAGAAA CAATTGATCA GAAGTGGGAA AACTCAATTG TAAATTGCTG GTTTAATCTT ACACAAATAG GGCCGTCATA TTCCGAATTT GACAATTCTA TAAAAAACGT TGCTTCCAAT AACGAAATGC TGATAATTGA ATTAGGTTCT GCCTATAAAG AAGAAGTAAA TGACTCCAGA ATTGACGAGA TCTATCAGAA AATTGAGGAC TACTGCGAAC AGCAGGAAGG CATAGATGAA ATTCCTGTGG TCTTTATGTG GGCACATGAT GAGGAGAATC TCCCGTTACC TGATTATGGT CCTCAGATTT TCGATGAAGT TAAAACTGAG TCCGGATTCA TAACTACTCG GGGAACAATG CCTGTTATTA CAGACGCTAA TAAAAAAGTG GAATGGGAAG AAACAGCGGG AAATTGTATT CATAGTTTCA GAGATGATCT TCAGCCTTAC ATGAAATCAT CTGATGGATC ACTGACCGGT TACGGTTACA ACTACAGGGG ATATATATTT GTGGCTTTTG ACCCAAAATC TCTAGAAAAT GTTAATGATT CTATAATTGA CGAAATTTAT CTAATAATCG ACAACCACTG CAAACAAGAA GGAGTAAGCG AGGTACCCGT AGTTTTTGAG TGGAGAGGAG AGGCAATAGT TAATTTAGCA CCAGCCGTTG AACTAGATGT GAATGAAAGC GGTGATACCA ATTTCTCAGA TAATAAAGAA ACGATCGCTG GCAATGAGAA AACTAATCAA ACGCCTGGCT TTACTTCAAT AACTGCCATT TTGTTGCTTT TATCTTTACT GGTTTTCAAA CGCTCAGCAT GA
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Protein sequence | MLKRRNICKW LMFIICVSLF LCGSASANDN EFNDSKSNKI SEPSIKEFEN DPSFIAYRGT LPETIDQKWE NSIVNCWFNL TQIGPSYSEF DNSIKNVASN NEMLIIELGS AYKEEVNDSR IDEIYQKIED YCEQQEGIDE IPVVFMWAHD EENLPLPDYG PQIFDEVKTE SGFITTRGTM PVITDANKKV EWEETAGNCI HSFRDDLQPY MKSSDGSLTG YGYNYRGYIF VAFDPKSLEN VNDSIIDEIY LIIDNHCKQE GVSEVPVVFE WRGEAIVNLA PAVELDVNES GDTNFSDNKE TIAGNEKTNQ TPGFTSITAI LLLLSLLVFK RSA
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