Gene Mbar_A1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1300 
Symbol 
ID3627709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1609779 
End bp1610780 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content37% 
IMG OID637700190 
Producthypothetical protein 
Protein accessionYP_304843 
Protein GI73668828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.11265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.297989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAA GAAGGAATAT TTGCAAATGG CTAATGTTTA TTATTTGTGT TTCTCTCTTT 
TTATGTGGTT CTGCAAGTGC AAATGATAAC GAATTTAACG ATTCCAAATC TAATAAGATC
TCTGAGCCTT CTATAAAGGA ATTTGAAAAT GATCCCTCGT TCATAGCATA CAGAGGAACC
TTACCAGAAA CAATTGATCA GAAGTGGGAA AACTCAATTG TAAATTGCTG GTTTAATCTT
ACACAAATAG GGCCGTCATA TTCCGAATTT GACAATTCTA TAAAAAACGT TGCTTCCAAT
AACGAAATGC TGATAATTGA ATTAGGTTCT GCCTATAAAG AAGAAGTAAA TGACTCCAGA
ATTGACGAGA TCTATCAGAA AATTGAGGAC TACTGCGAAC AGCAGGAAGG CATAGATGAA
ATTCCTGTGG TCTTTATGTG GGCACATGAT GAGGAGAATC TCCCGTTACC TGATTATGGT
CCTCAGATTT TCGATGAAGT TAAAACTGAG TCCGGATTCA TAACTACTCG GGGAACAATG
CCTGTTATTA CAGACGCTAA TAAAAAAGTG GAATGGGAAG AAACAGCGGG AAATTGTATT
CATAGTTTCA GAGATGATCT TCAGCCTTAC ATGAAATCAT CTGATGGATC ACTGACCGGT
TACGGTTACA ACTACAGGGG ATATATATTT GTGGCTTTTG ACCCAAAATC TCTAGAAAAT
GTTAATGATT CTATAATTGA CGAAATTTAT CTAATAATCG ACAACCACTG CAAACAAGAA
GGAGTAAGCG AGGTACCCGT AGTTTTTGAG TGGAGAGGAG AGGCAATAGT TAATTTAGCA
CCAGCCGTTG AACTAGATGT GAATGAAAGC GGTGATACCA ATTTCTCAGA TAATAAAGAA
ACGATCGCTG GCAATGAGAA AACTAATCAA ACGCCTGGCT TTACTTCAAT AACTGCCATT
TTGTTGCTTT TATCTTTACT GGTTTTCAAA CGCTCAGCAT GA
 
Protein sequence
MLKRRNICKW LMFIICVSLF LCGSASANDN EFNDSKSNKI SEPSIKEFEN DPSFIAYRGT 
LPETIDQKWE NSIVNCWFNL TQIGPSYSEF DNSIKNVASN NEMLIIELGS AYKEEVNDSR
IDEIYQKIED YCEQQEGIDE IPVVFMWAHD EENLPLPDYG PQIFDEVKTE SGFITTRGTM
PVITDANKKV EWEETAGNCI HSFRDDLQPY MKSSDGSLTG YGYNYRGYIF VAFDPKSLEN
VNDSIIDEIY LIIDNHCKQE GVSEVPVVFE WRGEAIVNLA PAVELDVNES GDTNFSDNKE
TIAGNEKTNQ TPGFTSITAI LLLLSLLVFK RSA