Gene Mbar_A1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1296 
Symbol 
ID3627705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1605712 
End bp1606458 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content39% 
IMG OID637700186 
Producthypothetical protein 
Protein accessionYP_304839 
Protein GI73668824 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0615608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.430138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGGA AGAATGAAAA AAAATTATCC AAACTAAAAG ATTTCTGGGT AGAATTTTTC 
GCAGATCGGA AAGACGGCGG CCACAGATCT TCAGATGAGG AATTTATTTC CCTGGAAGCT
AAGGAAAAAC TATTCCATCT GGATGGGGGC AAAACCCTGC TTGATTTTGG ATGCGGTGCC
GGTGAGCTCC TGGTTTACTA TGCACCGGAA TATAAACAGC TCGTAGGAGT TGATTTTTCC
GCATCCATGC TTGATGAAGC AAGCAAAAAA ATCAGGGAAA GAAAATGTGG GAATATATCG
TTAATTCAGG CTGATGATAA AACTGTCTGG GACAAACTGG AATACTCTTT TGATCGGATA
ACCGCAGCTG GAGTGATTCA GTATTTGACA TTGCAAGAAA TTGATAACTT TATCTTTAAC
GCGTCAAATT ACCTTAATAA AGGGGGTAAA ATAGTGTTGT TTGATATACT GGACCCCCGC
TTATATCCAT TATGGAAAAT AGGGCTGTTT TCACAAGATG CAGGCTTCGG GAAAATATTA
CGCAAAGTCG GGTTTGAGTT TAAGGTTATA TTATCGGCAA GCTTGAGTAA TCGACCAAGA
GATATTCTTG GGTTTGCTCA CAACCCCTAT GCAATTAAAA AGATAGCAAA TAGATATGGT
TTTGAAACTA TTTTTGTAAA ATCAATGTAT TACGAGTACA AGTATCATGC AATAATATCT
CGAACTTCAG AGTCTCGGGA GTTTTAA
 
Protein sequence
MPGKNEKKLS KLKDFWVEFF ADRKDGGHRS SDEEFISLEA KEKLFHLDGG KTLLDFGCGA 
GELLVYYAPE YKQLVGVDFS ASMLDEASKK IRERKCGNIS LIQADDKTVW DKLEYSFDRI
TAAGVIQYLT LQEIDNFIFN ASNYLNKGGK IVLFDILDPR LYPLWKIGLF SQDAGFGKIL
RKVGFEFKVI LSASLSNRPR DILGFAHNPY AIKKIANRYG FETIFVKSMY YEYKYHAIIS
RTSESREF