| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1288 |
|---|
| Symbol | |
|---|
| ID | 3627697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1595893 |
|---|
| End bp | 1596933 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637700178 |
|---|
| Product | formylmethanofuran dehydrogenase, subunit F |
|---|
| Protein accession | YP_304831 |
|---|
| Protein GI | 73668816 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAG ATATGCGATT GTCTGTCTTT GCTGAAAAAA AAGACAAGCA GCTGATCTAT
TCCCCCGAAA AATGTATTGG CTGCGGGACC TGTGTGCAGG CATGCCCGAA AGGTAACCTG
GCCATAGGGG CTGTTGGAGC TATAACAAGA GGGTTAGTAG ATGCGGATTT CCTGGAAATG
AAAGAACGTG AAGCCTGCCT TGTCTGTGGA ATTTGTGCGA AAGCTTGTCC CACAGGTGCT
CTTGAAATGA AGCAGGAAGG AAAAACCATC ACTGACAAGT CTTATCTTTT CAGGGCTATG
AAACCGACGT CAGTAAACGA AAGCTGCGTC CACTGTGGGC TTTGTGAGGA TATCTGTCCT
CAAGGCTGTA TTGAAGTAAC ACGGGATATT TCAGCGGATG GTAAACTGAA GCTGGTTGGA
AAGACCAATA TTGATACTGA ATGCTGTGTC CACTGCGGCT GGTGTGCAGC AGTCTGTCCG
GTAAATGCTA TTTCTGTAGA AAAGCCATTC GAAGGACACT GGGCCAGGGA TGAAGATGTC
TGCCAGACCT GCCATACCTG TGTGGAAGTA TGTCCTGCAA ATGCTATTTT CAATAAAAAA
GCCAAACCTG GAGAAAGAGT CGAAAAGATC ACTCACCGTC CAGATGCCTG CATTTACTGT
GGGGCCTGTG CGGTTGCCTG CCCTGTTGAC GCCATAGATG TAAGAAAAAC TGCAATTCTC
CCGGACATGG AGAAAAAGGG CGTTCTTGAG AAGAAGCTGC TTGAAAAACC TGCTCCAGAG
ACTATGCTCC GTACCTGCCT GGAAACTGAT GAAGCTGCAT GCTTGGGCTG CGGAAACTGT
GTAATTGTCT GCCCGGTGAA TGCCCTTTCT GACTGTGAAC TTGCAGCCGG ACACCTGAAC
AACATGGACG AAAAAGCTCT TCTAGGGGTT AAAAACGGAA GAATTAAAGT CATAGATCAG
GACCGCTGTG GAGCAGATGG AGCCTGCGCC ATGATCTGCC CTGTTGATGC GATCAGGCTT
GTAAAAAGAG AGGTGAAATA A
|
|---|
| Protein sequence | MQEDMRLSVF AEKKDKQLIY SPEKCIGCGT CVQACPKGNL AIGAVGAITR GLVDADFLEM
KEREACLVCG ICAKACPTGA LEMKQEGKTI TDKSYLFRAM KPTSVNESCV HCGLCEDICP
QGCIEVTRDI SADGKLKLVG KTNIDTECCV HCGWCAAVCP VNAISVEKPF EGHWARDEDV
CQTCHTCVEV CPANAIFNKK AKPGERVEKI THRPDACIYC GACAVACPVD AIDVRKTAIL
PDMEKKGVLE KKLLEKPAPE TMLRTCLETD EAACLGCGNC VIVCPVNALS DCELAAGHLN
NMDEKALLGV KNGRIKVIDQ DRCGADGACA MICPVDAIRL VKREVK
|
|---|
| |