Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1282 |
Symbol | |
ID | 3627769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1588446 |
End bp | 1589348 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637700172 |
Product | oligopeptide ABC transporter, permease protein |
Protein accession | YP_304825 |
Protein GI | 73668810 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.284613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGTG TATTTGCTAA CAAATTAAGA AAAAAGAGAG TTTCACTTCC GAAAGCTTAC GGAAGTCAAT TTACAAAAAG AGTTTTTCAA AGAAAAGATA TGCTTTTTGC ACTTTCATCC CTTTTGCTTT TTGCTGGGCT TGCCATTTTT GCTCCCCTGC TTTCCCCTTA CGACCCCAAT GCAATTGACC TGAAGAACAA GAATCTGAGT CCTTCAGAAG AGCACATCCT GGGTACCGAT TACCTCGGAA GGGATATCCT GAGCCGAATC CTTATAGGAG CCCGGACTTC CCTTTCAATT GCTTCAGGAG TAGTGCTGAT TTCCCTGTTC CTGGGAACTG CTGCGGGATG TGCAGCAGGC TATTATGGAG GCTTTGTGGA TGAAAGCATC TCCAGAGTTA TAGATATCTT CCTTTCTTTT CCAGGGATCA TCTTTGCTCT CACTATTATG GGGGCACTCG GGACCGGAGT TTTCAACCTG ATGCTTGCTC TCTCTATAGC CAACTGGGCA AAGTACGCCA GGATGATGCG GGGGCAGGTC CTTTCTATCA AAAAACAGGA GTTTGTCCTT TCCGCGATAA CGGGCGGAGC CGGAGATTTT TATATAATCC GCAAGCATAT TGTACCCAAT GCCATAGCCA CTATCCTCGT GCTGGCCACA ATAGATTTCG GGCACGTAAT TCTCTCTATT GCTACATTAA GTTTTCTTGG AATAGGGCTG CCTGCCGATG TGCCTGAATG GGGGGCAATG CTTTCCTCAG GAAAGGAATT CATGAGGACA GCTCCTTACC AGACGATCTT TCCAGGGCTT GCCATAACCT TCATTGTGAT CATTTTCAGC ATTCTTGGAG ACGGTATGAG GGATATCCTT GACCCAAACC ACGAAGGAGG CGAAATCGAT TGA
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Protein sequence | MDSVFANKLR KKRVSLPKAY GSQFTKRVFQ RKDMLFALSS LLLFAGLAIF APLLSPYDPN AIDLKNKNLS PSEEHILGTD YLGRDILSRI LIGARTSLSI ASGVVLISLF LGTAAGCAAG YYGGFVDESI SRVIDIFLSF PGIIFALTIM GALGTGVFNL MLALSIANWA KYARMMRGQV LSIKKQEFVL SAITGGAGDF YIIRKHIVPN AIATILVLAT IDFGHVILSI ATLSFLGIGL PADVPEWGAM LSSGKEFMRT APYQTIFPGL AITFIVIIFS ILGDGMRDIL DPNHEGGEID
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