| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1269 |
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| Symbol | |
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| ID | 3627756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1576022 |
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| End bp | 1578268 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637700159 |
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| Product | RND superfamily protein |
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| Protein accession | YP_304812 |
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| Protein GI | 73668797 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR00921] The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAG GAACAGAAAC CTTTGTCGGA AAAGACTCTC CTCTCTACCA GGATTATGAT
CACCTTTATC AAAAAATATT CCAGACACAA TCTGTTGTGG TAATGGTAGA GGGCAACGAT
GTAGAAACTG CTGACGTGAT GAAAGCTGTA GACAGGTTAG AACATCAGGT TCAGGCAACC
AATGGGGTAA TTGAAACTAC AAGCCCCGCT TCACTGACCA AACAGATCAA TTATAAGATG
ACAGGGAAAT CTGAAATCCC TGATACCGAT AAAGAAATAA AAACCATTGT GGATGGAAAC
CCTGATATTT TCGGCCAGCT TATTCCTGAC AATACTCATA TGGTAATTTC GGTAGTCATG
GCCGGTTCAG CTAGTGAAGA TAATCAGGAA GATATCCTTG TTTCCACTCA AGAAGCTGTT
TCGTTGGCGG ATTTTCCACC TTCTTACAAC ATCATTGTTA CTGGCGATCC AGCATTCATG
GTTTCCATGA ACAATGAGAT GAATTCCAGT ATGGGAGTGC TTCTAGGACT TTCAGCGGTT
TTCATGGTTA TTGTACTGCT TATAGTGTTC AGGCACGTTC GTTGGTGTCT TCTTCCTCTG
CCGATAGTTC TTCTTGGTAT TGTTTATACC TTCGGGGCTA TGGGTTATGT AGGAATTCCA
ATGTCCATGG TTTCCATGGC TGCATTCCCT ATCCTTATAG GCTTAGGAAT TGACTATGCT
ATTCAGTTCC ATAACCGACT TGAGGAGGAA CTGCAGGAAA AAGGAAACAA AAAAACAGCA
GTTATAGAAA CCGTAAAGCA TACTGGACCT GCAGTCCTCA CAGCTCTGGC GATGACAGCC
CTTGGATTTA TCTCTCTTTT TACATCTACG GTACCAATGA TCCGGGATTT TGGTAAATTG
CTCATGATAG GCATTTTAAT GTGTTACTTA TCCTCTATCT TCGTAGGGGT TATTACAATT
TCTTTATTTG ACAAATACTC GGATAAAAAC CCCCTGAGGA AGGTAGCCAG TAAGATAAAA
TCCGCAAATC CGGAAAAGAA GAAAAAGTCT GAGGATGGAG AAGAAAGTGG TCGCCTTATA
GGAAGGATAC TCCAGAAAAC CACAAAACTA ACTATCAAGT ATGACATTGT CGTACTGGGA
GTTGCACTCT TGCTCTGCTT TGGCGGTCTT TACCTCGACA GGTCTGTGCC TATTCAGACT
GATGTTGAAA CCTTTGTGCC TCAGGACATG CCTGCACTCG TGGATCTCCA CCATATGGGA
AACATCATGG GCAATGGCGA TGAATTAAAC CTTATCATCA AGGTTAAGGA TGTAGCTAAT
CCAGATGTCC TTAAGTGGAT TGACCAGTTT TCCGAACATG AAGCGGAGTC CAATAGCCAC
ATTTACGGCT CTTCGAGCAT TGTAGATCTT GTAAAGGAAT ACAATGGAGG AGTAATTCCC
GATACCAGCC AGGAAATAAA GGATATTTAC TCTGAAATTC CTGAGTCACA GAAAGACCGC
TATATATACG GGAATAATAT GCTTCTCCTG AACTTCGACA TAGGGAATGC GGTTGCGGAC
ATAAAGGTAA CAGGTATTGA AGAACTCAGG AACATTGTCA AGCAGGATAT GCAGTGGATG
CCGGCTCCAC CAGGCACCGC TGTCACGATT ACTGGAAACT CGGTTGTGTA TATAGAGGTT
ATCTCTGCTC TTACCAGCGG AAGAATAGCA ATGACTTTCC TTGGTCTGAT TCTCGTGCTT
GCAGGGCTTC TTATTGTATA CAAAGACTGG GTGAAAGCCC TGGTTCCTAT AATCCCAATG
TTAATAGTTA TTGGATGGTC AGGCGGAGTA ATGAGCCTTC TCAATATTAG CTATACTCCT
CTCACAGCAA CCCTGGGAGC TCTTATACTG GGAGTAGGGT CGGAATACGC TATCCTCATG
ATGGAACGTT ACTTTGAAGA AAAGGAGAAA GGTGCAAGTC CTTTAGAAGC TATTCTGATG
ACCAGTTCCA AAATAGGAAG TGCAATTGTT GCTTCAGGAG CCACGACAGT ATTCGGGTTT
ATGGCCCTGC TGGCTTCTCC TTTCCCCATA ATAACCGACT TCGGTACAGT TACAGTTATC
GATGTCTTGC TGGCTCTCCT GGCAACCTTT GTAGTCTTCC CTCCGCTTAT GATTACTTTT
GATACCTGGC GCGATAAAAG AAAAGGAGCT AGGAAAGCAG AAAAACAGGA AGAGACAAAA
AAGCAAATAC AGGGGGCCGA GATATGA
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| Protein sequence | MESGTETFVG KDSPLYQDYD HLYQKIFQTQ SVVVMVEGND VETADVMKAV DRLEHQVQAT
NGVIETTSPA SLTKQINYKM TGKSEIPDTD KEIKTIVDGN PDIFGQLIPD NTHMVISVVM
AGSASEDNQE DILVSTQEAV SLADFPPSYN IIVTGDPAFM VSMNNEMNSS MGVLLGLSAV
FMVIVLLIVF RHVRWCLLPL PIVLLGIVYT FGAMGYVGIP MSMVSMAAFP ILIGLGIDYA
IQFHNRLEEE LQEKGNKKTA VIETVKHTGP AVLTALAMTA LGFISLFTST VPMIRDFGKL
LMIGILMCYL SSIFVGVITI SLFDKYSDKN PLRKVASKIK SANPEKKKKS EDGEESGRLI
GRILQKTTKL TIKYDIVVLG VALLLCFGGL YLDRSVPIQT DVETFVPQDM PALVDLHHMG
NIMGNGDELN LIIKVKDVAN PDVLKWIDQF SEHEAESNSH IYGSSSIVDL VKEYNGGVIP
DTSQEIKDIY SEIPESQKDR YIYGNNMLLL NFDIGNAVAD IKVTGIEELR NIVKQDMQWM
PAPPGTAVTI TGNSVVYIEV ISALTSGRIA MTFLGLILVL AGLLIVYKDW VKALVPIIPM
LIVIGWSGGV MSLLNISYTP LTATLGALIL GVGSEYAILM MERYFEEKEK GASPLEAILM
TSSKIGSAIV ASGATTVFGF MALLASPFPI ITDFGTVTVI DVLLALLATF VVFPPLMITF
DTWRDKRKGA RKAEKQEETK KQIQGAEI
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