| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1267 |
|---|
| Symbol | |
|---|
| ID | 3627867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1573832 |
|---|
| End bp | 1574890 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637700157 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304810 |
|---|
| Protein GI | 73668795 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1361] S-layer domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATA AAAATGGATT ATTTATTACT GTCACAACTC TTCTGATCCT TTGCTGGGCA
GTCTTCCCAG CGCAGGCAGC TGTACCAGAA CATTTTGATA TTAGTGAAAA TTACTACTCA
GTATACGGAG GGCCTGACCT TAATGCAACA CTTGTTGGGG ACAATCAGTA CTCTAGAGGA
GATACTGTAA CTCTCAATCT AAATATGATG AATAAGGGTG AAATTTCCGG CTTTAAATCT
GAAAAAGATG CAGATATTGG AGATTATGCA GATGAGATGC TACAGCAGTC AGAGATGCAG
TATGAAGCGC AGGCTACGAC AGCAATAGGC ATTCTTGCAA CCCTTAGATC TGATAGTCCT
AACATTAAAG TTAAGTCTGG ACCTCAAGAA GCTGGAACTC TCAAGCAGGG AAAAGAAAGT
GCAAGTCCCA CAAAGTTTAC AATTGAGATT AATAAAGATA CTCCTGCAGG TATATATCCT
CTGACCCTCG ACATTTCGTA TCAGTACCAG AATAATGTCC AGGTCGGCGG AGACGATTTT
GACAGTGTTA CAGGCCTCGT AACAAATAAG GAAGTAGGTA TCTGGTATGA AAATAAGACC
CAGACGCAGA CCATAAACAT CGAAGTCAAG AAGGAACCTT ATTTTGAAGT TACAAACGTA
ACAGGTGACC TTTACCCCGA TGACGGTGGG ATGCTTTACG TTACATATAA AAACACAGGA
GAAGAAACCG CAAAAGATGC AACCGTTAGA ATTAGCGCAT CTGATCCCTT CAGTACCACT
GATGACCAGG CTTATCTTGG AACTCTGAAA ACCGGAGACA GTGAAGTTGC TGTTTTCGAT
ATGGGTGTAG ATGAAACTGC AACTGCAAAG CCATACTCTA TAAGCAGCGA GATTTTCTAC
GAGGATTCTG ATGGGCATGA CCAGACTTCG GATACTGTCA AGGTCAATAC CGAAGTTCTG
GAGGCAAAAA ACTCTCTTCC GGGATTTGAG CTTGGGACAG GCATTACAAT GGCTCTAGCT
GCATGCTTTG TAATGCTCAG GAGAAAGAAA CAGGATTGA
|
|---|
| Protein sequence | MNNKNGLFIT VTTLLILCWA VFPAQAAVPE HFDISENYYS VYGGPDLNAT LVGDNQYSRG
DTVTLNLNMM NKGEISGFKS EKDADIGDYA DEMLQQSEMQ YEAQATTAIG ILATLRSDSP
NIKVKSGPQE AGTLKQGKES ASPTKFTIEI NKDTPAGIYP LTLDISYQYQ NNVQVGGDDF
DSVTGLVTNK EVGIWYENKT QTQTINIEVK KEPYFEVTNV TGDLYPDDGG MLYVTYKNTG
EETAKDATVR ISASDPFSTT DDQAYLGTLK TGDSEVAVFD MGVDETATAK PYSISSEIFY
EDSDGHDQTS DTVKVNTEVL EAKNSLPGFE LGTGITMALA ACFVMLRRKK QD
|
|---|
| |