| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1261 |
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| Symbol | |
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| ID | 3627861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1564816 |
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| End bp | 1565568 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637700151 |
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| Product | tetrahydromethanopterin S-methyltransferase subunit D |
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| Protein accession | YP_304804 |
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| Protein GI | 73668789 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4060] Tetrahydromethanopterin S-methyltransferase, subunit D |
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| TIGRFAM ID | [TIGR01112] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGACG CTATCTTAGG AAATATCATC TGGATGGCTC TTATCACAAT AGGCGGCGTT
TTGATTTCCT GGAGTGTCCA CTTCGTGCCT GTGGGCGGTG CACCTGCAGC TATGGCTCAG
GCAACTGGTA TTGGTACCGG TACAGTGCAG CTGGCAGCAG GTGCCGGTCT GACAGGGCTT
GTTAGTGCAG GCTTTATGAT GAACGTAACA GATAACCTTC CGCTGATTCT CGCATCAGGC
TCAGTGGGAG CAATGATCAT GATCGCTGTG ACCATGATTG TCGGTAGCAT TGTCTACGTC
TATGGTGTGG GTGTTGTACC TTCTTCCGCA AAAGTAAAGG TTGACCCAAT TACAAAGTAC
AGGCAGGACC TTTATGTATC TCAGGGTACT GAAGGGCACG GGCTTCCGAC AGTAAGTTAT
GTGAGTGGAA TTATAGGCGG TGGCCTTGGT GGAATAGGAG GGTCCCTTGT TTACTATTCA
CTCATAGAAG TGGGCATGAG TGCAGGCCTG GAAGCGGTCG GAGTTACCAA TTCAGTCACA
GGACATGAGC TTGTAGCAGT TGCAGCAATA TTTGCAATAG GCATTTTCTT CGTGAACGCT
GTAATTCCAT CCTATAACAT AGGAGGTACA ATTGAAGGGT TCCACGATCC AAAATTCAAA
AAATGGCCAA AAGCGGTAGT TTCTTCTCTC GTAGCATCAA TAATGTGTGC TATCGTGGCG
GTAGTTGCAA TCGCACAGCT CGGAGGTATT TAA
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| Protein sequence | MIDAILGNII WMALITIGGV LISWSVHFVP VGGAPAAMAQ ATGIGTGTVQ LAAGAGLTGL
VSAGFMMNVT DNLPLILASG SVGAMIMIAV TMIVGSIVYV YGVGVVPSSA KVKVDPITKY
RQDLYVSQGT EGHGLPTVSY VSGIIGGGLG GIGGSLVYYS LIEVGMSAGL EAVGVTNSVT
GHELVAVAAI FAIGIFFVNA VIPSYNIGGT IEGFHDPKFK KWPKAVVSSL VASIMCAIVA
VVAIAQLGGI
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