Gene Mbar_A1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1229 
Symbol 
ID3624277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1519674 
End bp1520672 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content38% 
IMG OID637700119 
Producthypothetical protein 
Protein accessionYP_304775 
Protein GI73668760 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00281517 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGAA AAACCGGAAA CAATGCTAAA ACAACTGTAA GCGCTGAGGT TGCAGAAACT 
CTTCTTCAGG AAGGATGGAG AAAAGTGGAT CTACATGTAC ACTCTTCCTG TTCCTATGAC
GTCCCTCCTG TTCAGACGAT GCACCCAAGA GTTCTTTTTG AAAAAGCAAG GTCGCAAGGA
CTTGATTTTG TGACTTTTAC CGACCATGAT ACTGTCAAAG CTTACGATCT GCTTGGTTGG
GATAAGGAAA GACTGGTTCC AGGGGTTGAG ATTTCAATTA GTGATCCTGA ACATATAGGA
CATACTCTAC ACGTTAATGT TTTTGAACTT GATTCGGAAG AATTTAAGGA ACTTGAGTTG
ATCGCAGATC AAGAACATGA TTTTAAAAGC TTTATCCACT ATCTAAGGAC TCACGATCTT
CCCCATATGT ATAATCATCC CTTTCAGTTT ACTGTCGGAG ACAGACCTAA TCTATGGGCT
ATACCTGAAC TTATAAAGCA ATTTCCCATT GTTGAATATA ACATGCAAAA CTTAACGGAA
AAAAACCTCA TGGTTGCAAC ACTAGCCAGA AAGTACGGAA AAGGAATTGC TGCGACTACA
GATAGCCATA CAGGAGGTAT GGGAGCTGTT TATACCCTTG CAAAAGGTGA AACTTTCAGG
GAATTTTTTG AAAATATTAA AAAAGGAAAT TCATATATTG TAGTTGAAGG AGGGACCAGG
CAACATCTTA CAAAAGAATG GAGTTCCTGG ATTGAGCTTA TTTTTTCCAT GGATCGACAG
TTAAGAGAAG ATTATAATTT CACTACAAAT GTCTGGAGCT TTGACAGATT AATAAATTTT
TTTACAAATG GGAAAATTAG AGAATTTCCC AGAATTAACA GCCTGACAAT GAAGTTTTTC
CAGAATTTCT CCAGATCAGG ACTCCCTGCT TATATATACA TAAAGACTGA AAAGCCTCTG
GTTTCTAGAA TAGAAGAGAT CTTGAATCAG ATAGCATGA
 
Protein sequence
MQGKTGNNAK TTVSAEVAET LLQEGWRKVD LHVHSSCSYD VPPVQTMHPR VLFEKARSQG 
LDFVTFTDHD TVKAYDLLGW DKERLVPGVE ISISDPEHIG HTLHVNVFEL DSEEFKELEL
IADQEHDFKS FIHYLRTHDL PHMYNHPFQF TVGDRPNLWA IPELIKQFPI VEYNMQNLTE
KNLMVATLAR KYGKGIAATT DSHTGGMGAV YTLAKGETFR EFFENIKKGN SYIVVEGGTR
QHLTKEWSSW IELIFSMDRQ LREDYNFTTN VWSFDRLINF FTNGKIREFP RINSLTMKFF
QNFSRSGLPA YIYIKTEKPL VSRIEEILNQ IA