Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1229 |
Symbol | |
ID | 3624277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1519674 |
End bp | 1520672 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637700119 |
Product | hypothetical protein |
Protein accession | YP_304775 |
Protein GI | 73668760 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00281517 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGGAA AAACCGGAAA CAATGCTAAA ACAACTGTAA GCGCTGAGGT TGCAGAAACT CTTCTTCAGG AAGGATGGAG AAAAGTGGAT CTACATGTAC ACTCTTCCTG TTCCTATGAC GTCCCTCCTG TTCAGACGAT GCACCCAAGA GTTCTTTTTG AAAAAGCAAG GTCGCAAGGA CTTGATTTTG TGACTTTTAC CGACCATGAT ACTGTCAAAG CTTACGATCT GCTTGGTTGG GATAAGGAAA GACTGGTTCC AGGGGTTGAG ATTTCAATTA GTGATCCTGA ACATATAGGA CATACTCTAC ACGTTAATGT TTTTGAACTT GATTCGGAAG AATTTAAGGA ACTTGAGTTG ATCGCAGATC AAGAACATGA TTTTAAAAGC TTTATCCACT ATCTAAGGAC TCACGATCTT CCCCATATGT ATAATCATCC CTTTCAGTTT ACTGTCGGAG ACAGACCTAA TCTATGGGCT ATACCTGAAC TTATAAAGCA ATTTCCCATT GTTGAATATA ACATGCAAAA CTTAACGGAA AAAAACCTCA TGGTTGCAAC ACTAGCCAGA AAGTACGGAA AAGGAATTGC TGCGACTACA GATAGCCATA CAGGAGGTAT GGGAGCTGTT TATACCCTTG CAAAAGGTGA AACTTTCAGG GAATTTTTTG AAAATATTAA AAAAGGAAAT TCATATATTG TAGTTGAAGG AGGGACCAGG CAACATCTTA CAAAAGAATG GAGTTCCTGG ATTGAGCTTA TTTTTTCCAT GGATCGACAG TTAAGAGAAG ATTATAATTT CACTACAAAT GTCTGGAGCT TTGACAGATT AATAAATTTT TTTACAAATG GGAAAATTAG AGAATTTCCC AGAATTAACA GCCTGACAAT GAAGTTTTTC CAGAATTTCT CCAGATCAGG ACTCCCTGCT TATATATACA TAAAGACTGA AAAGCCTCTG GTTTCTAGAA TAGAAGAGAT CTTGAATCAG ATAGCATGA
|
Protein sequence | MQGKTGNNAK TTVSAEVAET LLQEGWRKVD LHVHSSCSYD VPPVQTMHPR VLFEKARSQG LDFVTFTDHD TVKAYDLLGW DKERLVPGVE ISISDPEHIG HTLHVNVFEL DSEEFKELEL IADQEHDFKS FIHYLRTHDL PHMYNHPFQF TVGDRPNLWA IPELIKQFPI VEYNMQNLTE KNLMVATLAR KYGKGIAATT DSHTGGMGAV YTLAKGETFR EFFENIKKGN SYIVVEGGTR QHLTKEWSSW IELIFSMDRQ LREDYNFTTN VWSFDRLINF FTNGKIREFP RINSLTMKFF QNFSRSGLPA YIYIKTEKPL VSRIEEILNQ IA
|
| |