| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1223 |
|---|
| Symbol | |
|---|
| ID | 3624270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1510259 |
|---|
| End bp | 1511812 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637700113 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_304770 |
|---|
| Protein GI | 73668755 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0696] Phosphoglyceromutase |
|---|
| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTTCATA TGACTCAGGC AAAAAAACCA CTTATGCTCA TTATTCTTGA TGGCTGGGGC
TACAGGGAAG CAAGAGAAGG AAACGCTATC CTGGCAGCTA GAACTCCAAA TCTTGACCAC
CTGATAGAAG AATATCCCTG GTGTTTCTTA GAAGCCTCAG GGGAAGCTGT AGGCCTTCCA
GAGGGCCAGA TGGGAAACTC AGAAGTCGGG CACCTGAATA TCGGGGCAGG GCGAATTGTG
TACCAGGATC TAACCCGAAT AAATTTCTCC ATAAGGAAAG GTGACTTCTT CAAGAATCCT
GCTTTTTTGG GTGCAATTTC AAATGCCAAA GCCAACGATT CCAGCCTGCA TCTCATGGGG
CTTGTCTCCT ACGGAGGCGT TCACAGCTAT ATGGCCCATA TTCATGCCCT TATCAAGCTC
GCACAGCAGG AAGGGGTGAA AAAAGTATAT ATACATGCTT TTTTGGACGG CAGAGACGTG
CCTCCTAAAG CCGCCCTTAA AGATATAGAG GAGCTTGATG CTTTTTGTAA GGAGAACGGA
AATGCTAAAA TTGCAACTAT ATCAGGGCGC TATTACGCAA TGGACAGAGA TAAGCGCTGG
GATAGAACAA AACTTGCCTA TGATGCCCTG ACTATGGGAG TTGCGCCTTA CAAAACACCT
GATGCAGAAA CTGCAGTTTC TGAAGCTTAT AAAAGAGGAG AAACTGATGA GTTTGTAAAA
CCGACTGTAA TCACAGATTC AGAAGGAAAG CCTGAGGCAG TCATAAAAGA TAATGATTCT
ATAATCTTCT TCAATTTCAG GCCTGATAGA GCAAGGCAGC TTACCTGGGC TTTTGTAAAT
AAAGACTTTG AGAACTTTCC CAGAGAAAAA CACCCGAAAG TTTACTATGT TTGTATGGCC
CAGTATGATG AAACACTGGA CTTGCCTATA GCTTTCCCAC CGGAAGAACT TGAAAATGTG
CTTGGCGAAG TACTGAGCAA GCAGGGGCTG GCCCAGCTTC GGATTGCCGA AACCGAAAAG
TATGCTCATG TGACTTTTTT CCTGAACGGA GGACAGGAAA AATGCTATGA AGGAGAGGAT
CGCTGCCTCA TCCCATCACC AAAGATTGCT ACATATGACC TTAAGCCCGA AATGAGTGCA
TATGAAGTTA CGGAGGAAGT TATAGGGAGG ATTCGGTCAG GAAAGTATGA TGTGATTGTC
CTTAACTTCG CAAACATGGA TATGGTCGGG CACACCGGAA TCTTTGAGGC TGCAGTAAAG
GCAGTGGAAG CCGTAGATAG CTGCGTGGGC AAAATTGCCA CGGTTCTGAA AGAAGTAGGA
GGTGTAGCGA TTATAACTGC AGACCACGGG AATGCCGAAC AGATGGAAAA CCCGACAACG
GAAGAGCCGC ATACTGCACA TACTTCAAAT CCGGTAAAGT GCATTTACTT CGGAAATGAT
GAAGTTAAAG GACTTAAGAA CGGAAAACTG TGTGATCTTG CACCAACCCT TCTAGAACTC
CTCAAGATCC GAAAGCCTGA GGAGATGACA GGAGAATCTC TTATTATAAA ATAA
|
|---|
| Protein sequence | MLHMTQAKKP LMLIILDGWG YREAREGNAI LAARTPNLDH LIEEYPWCFL EASGEAVGLP
EGQMGNSEVG HLNIGAGRIV YQDLTRINFS IRKGDFFKNP AFLGAISNAK ANDSSLHLMG
LVSYGGVHSY MAHIHALIKL AQQEGVKKVY IHAFLDGRDV PPKAALKDIE ELDAFCKENG
NAKIATISGR YYAMDRDKRW DRTKLAYDAL TMGVAPYKTP DAETAVSEAY KRGETDEFVK
PTVITDSEGK PEAVIKDNDS IIFFNFRPDR ARQLTWAFVN KDFENFPREK HPKVYYVCMA
QYDETLDLPI AFPPEELENV LGEVLSKQGL AQLRIAETEK YAHVTFFLNG GQEKCYEGED
RCLIPSPKIA TYDLKPEMSA YEVTEEVIGR IRSGKYDVIV LNFANMDMVG HTGIFEAAVK
AVEAVDSCVG KIATVLKEVG GVAIITADHG NAEQMENPTT EEPHTAHTSN PVKCIYFGND
EVKGLKNGKL CDLAPTLLEL LKIRKPEEMT GESLIIK
|
|---|
| |