Gene Mbar_A1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1220 
Symbol 
ID3624267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1507461 
End bp1508591 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content50% 
IMG OID637700110 
Productcation efflux family protein 
Protein accessionYP_304767 
Protein GI73668752 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTTAA CAGGGAAACA GGAAAGGCTC AGGATTGGAA GGCAGTTCTG GAAGTCAAAG 
AACAAAAATC CGAAGCTTCT TGAAAAGTGG GAATTTACCG GGGGAATTCA AACGCTTCCA
AACGCTGACT TTGAAGAGTA CGAACATACC CACAACCACA GCAAGCACGC CCATGTTCAC
ACCCATGGGG CTGTAGACCC TTCCATCATC TCCACGGAAA GGGGGATCTG GGCTGTCAAG
TGGTCTTTTG TAGGGCTCAT GGCAACCGCT CTGGTCCAGG TTGTAATCGT GTACGTCACA
GGGAGTGTCG CTCTTCTTGC TGATACCATC CATAACTTCG GGGATGCCGC AACAGCGATC
CCCCTGGGTT TCGCCTTTAT TCTCTCTCGC AGGGAAGCGA ATAAGCGCTT CACCTACGGC
TACGGCAGAG TAGAAGACCT GGCAGGGGTT TTAATAGTCT TTCTGATGCT CTTTAGCGTC
CTGGTGGTAG CTTATGAGTC AATCGACCGG CTCTTCCACC CCCAGAGTTT GAGTTTTCTG
GGAGCCGTTG CTGCTGCTTC AATTATCGGG TTTATAGGAA ATGAAATCGT GGCTGAATTC
CGGGTCAAGG TAGGAAAGGA AATAGGAAGT GCAGTCCTTA TTGCCGACGG CTACCATGCC
CGGATAGACG GGTATACAAG CCTGGCTGTG CTCTTCGGAG CTGTTGGCGT CTGGCTCGGT
TATCCCCTTG CGGACCCGAT TATAGGACTT ATTATCACCC TGGCAATCCT GCACATTGTC
TGGGACTCCG GCAAAGCTGT CTTTACCCGT ATGCTCGACG GTGTGGACCC GGAAGTAGTA
GAGGAAATTG AGCATGAAAT CGTCCATGTT GAAGGGGTGA AGGAAATAAA AGAAGTACGA
GTGCGCTGGA TAGGGCACAG GCTGCATGCT GAAGTGAACA TAGCAGTTGA TCCCGTGCTA
TCTGTTAAAG AAGGGCATGA AATTGCTATG GATGTCAGGC ATGAAATGAT GCATCACCTT
GAATATCTTT CCAACGCTGT CATTCATGTG GACCCGATGG GGTATTCCGG GGAAGAATAC
CACCGCATTG AGGAACATGA GCACGTGGGA TATCCTCCGC ATGAGCATTG A
 
Protein sequence
MFLTGKQERL RIGRQFWKSK NKNPKLLEKW EFTGGIQTLP NADFEEYEHT HNHSKHAHVH 
THGAVDPSII STERGIWAVK WSFVGLMATA LVQVVIVYVT GSVALLADTI HNFGDAATAI
PLGFAFILSR REANKRFTYG YGRVEDLAGV LIVFLMLFSV LVVAYESIDR LFHPQSLSFL
GAVAAASIIG FIGNEIVAEF RVKVGKEIGS AVLIADGYHA RIDGYTSLAV LFGAVGVWLG
YPLADPIIGL IITLAILHIV WDSGKAVFTR MLDGVDPEVV EEIEHEIVHV EGVKEIKEVR
VRWIGHRLHA EVNIAVDPVL SVKEGHEIAM DVRHEMMHHL EYLSNAVIHV DPMGYSGEEY
HRIEEHEHVG YPPHEH