| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1216 |
|---|
| Symbol | |
|---|
| ID | 3624563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1504316 |
|---|
| End bp | 1505011 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637700106 |
|---|
| Product | cobalt transport protein CbiM |
|---|
| Protein accession | YP_304763 |
|---|
| Protein GI | 73668748 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATAT TCGAAGGTTT CCTTCCGGGT CCCTGGTGGC AGATCTGGTG GATACTCTCA
ATACCGGTAT TTGCTTATGG AATTTTCCGG CTGAACAAGC TGGTGAAAGA AAAACCTGAA
GTGCTGCCTC TGATCGCTGT ATCAGGAGCT GTTATTTTTG TGTTATCATC GCTTAAGCTG
CCTTCGGTTA CCGGCAGTAC TTCTCATCCA ACCGGAACCG GGATGGCAGT CATACTTTTC
GGGCCTGCAA TAACATCAGT GCTCTCTGCA ATTGTCCTGC TTTACCAGGC TTTGTTTTTG
GCTCACGGAG GAATTACGAC TTTCGGGGCG AACCTAATGT CCATGGGGAT CATAGGACCC
TTTGTTGCTT ATGCCATATA TAAAACCATG ATGCGTTTGA ACGTTAATTT TTATGTGTCA
GCTTTTGTAA CAGCAACCCT GGCAGATTGG GTCACGTACG TTGTGACCTC AACGCAGCTT
GCACTGGCTT TTCCGGCGAA CCCCGGAGGT GTTGAAGGTT CACTCGTAGC GTTCCTGAGC
GTTTTTGCGA TTACCCAGAT CCCACTTGCG ATCCTCGAAG CTTCGCTGAT CACTCTGCTC
TTCAAGTACG TGCTGCAGGC AAAGGGCGAT TTGATGGTCA GGCTTGACGT GCTTACCGAC
TCGCAAGTAA GAAAACTAAA GGAGACGAAG GCTTAA
|
|---|
| Protein sequence | MHIFEGFLPG PWWQIWWILS IPVFAYGIFR LNKLVKEKPE VLPLIAVSGA VIFVLSSLKL
PSVTGSTSHP TGTGMAVILF GPAITSVLSA IVLLYQALFL AHGGITTFGA NLMSMGIIGP
FVAYAIYKTM MRLNVNFYVS AFVTATLADW VTYVVTSTQL ALAFPANPGG VEGSLVAFLS
VFAITQIPLA ILEASLITLL FKYVLQAKGD LMVRLDVLTD SQVRKLKETK A
|
|---|
| |