| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1212 |
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| Symbol | |
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| ID | 3624559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1501395 |
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| End bp | 1502411 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637700102 |
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| Product | flap endonuclease-1 |
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| Protein accession | YP_304759 |
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| Protein GI | 73668744 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACAG ATATAGGCGA CCTGCTCCAG AAAAGAAAAA TTGAGCTTTC GGATCTTACA
AATCAGGTGG TTGCAATTGA TGCGTTTAAC ACGCTGCACC AATTTTTGAG TATTATTCGC
CAGCGGGATG GAAATCCTCT GGTTAATTCA CGCGGGAAAG TGACGTCTCA CCTCTCTGGC
CTGCTCTACA GGACAGCGAG CCTGATTGAA GTTGGCATCA AACCTGTTTT CATTTTTGAT
GGTAAGCCTC CAGACCTGAA ATCTGAGACC CTGAACCGAA GGAAAGAAGT TAGAGAATCT
TCACTGGAAA AATGGGAAAA TGCAAAAGTT GAAGGGGATC TTGAAGCCGC TTATAAATAT
GCTCAGGCTT CTTCAAAGGT TGACCAGGAA ATTGTTGAAG ATTCCAAATA CCTCCTCAGC
ATAATGGGCA TTCCGTGGAT ACAGGCTCCC TGTGAAGGAG AGGCGCAGGC TGCCCATATG
GTCCTTAAAA AAGATGCCGA TTATGTTGCT TCCCAGGACT ACGATTCTTT CCTTTTCGGA
GCTCCGACTG TCATCCGCAA TCTTGCTGTC ACTGGCAAGC GCAAGCTCCC TGGAAAGCAT
GTGTATGTTG ATGTCGAACT TGAATTGATT GAACTGGAAG AGACACTGGG AGTTCTGGGA
ATAAATAGGG AGCAACTTAT TGATATTGCA ATTTGTGTCG GTACCGATTT TAACAAAGGA
TTGGAAAAAG TGGGTCCCAA AACAGCCCTT AAACTGATTA AAAAGCATGG AGACATCCAT
GCCGTACTCC GAGAAAAAGG GGTGGAAATC AAAGAACTGG ACAGAATCAG GGAACTTTTT
ACTCATCCTG ATGTTACGGA TGACTATGAA ATCAAGTGGG GCAAACCTGA TTCCGAAAAA
CTCATCAAAT TCCTTTGCAA GGAAAACGAC TTCTCTGTGG ATAGAGTGAA AAAAGCCGTA
GAACGTCTGA AGGTAGTATC CAGGGGGAGG CAGCAGACCC TAGACCAGTG GTTCTGA
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| Protein sequence | MGTDIGDLLQ KRKIELSDLT NQVVAIDAFN TLHQFLSIIR QRDGNPLVNS RGKVTSHLSG
LLYRTASLIE VGIKPVFIFD GKPPDLKSET LNRRKEVRES SLEKWENAKV EGDLEAAYKY
AQASSKVDQE IVEDSKYLLS IMGIPWIQAP CEGEAQAAHM VLKKDADYVA SQDYDSFLFG
APTVIRNLAV TGKRKLPGKH VYVDVELELI ELEETLGVLG INREQLIDIA ICVGTDFNKG
LEKVGPKTAL KLIKKHGDIH AVLREKGVEI KELDRIRELF THPDVTDDYE IKWGKPDSEK
LIKFLCKEND FSVDRVKKAV ERLKVVSRGR QQTLDQWF
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