Gene Mbar_A1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1208 
Symbol 
ID3624555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1493557 
End bp1496373 
Gene Length2817 bp 
Protein Length938 aa 
Translation table11 
GC content42% 
IMG OID637700098 
ProductHef nuclease 
Protein accessionYP_304755 
Protein GI73668740 
COG category[L] Replication, recombination and repair 
COG ID[COG1111] ERCC4-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.599416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA ATCTTTTTTC TGAAAAACCT GGGTTCATGA AGCACCCGCT GATAAAACCC 
AATACCGTTG AGCAGAGGCT ATATCAGTTG AATCTTGCTG GAAAGGCACT CGAAGGATCA
AGCCTTGTTG TGCTTCCTAC TGGGCTTGGA AAAACCATAA TAGCTCTTTT TGTAATTGTT
TCCAGGCTTC AGCGTTTCGG GGGAAAAGCG CTGGTTCTTT CTCCAACAAA ACCGCTTGTT
GAGCAGCATG CGGCTTTTTT CAAAAAAGTA ATGGCTCTTC CTGAAGATAA AATTCTCACT
TTTACGGGCA GCATTGCGCC TGCAGAACGT GAAAAACTCT GGGCTCAGGG GGAATTGATA
GTATCCACTC CTCAGGTGAT TGAAAACGAT CTTCTTACAA AAAGAATCAG CCTTGAAGAT
GTAACCCACA TAACCTTTGA CGAAGCCCAC AGGGCAGTCG GAAATTACGC TTATACCTTT
ATTGCGGAAA AATACTTCGA AAGCGCAAAA AACCCTCATG TGCTCGGAAT TACTGCAAGC
CCTGGAAGTT CGGACGAGAA AATCTCTGAA GTCTGCCAGG CTTTGCACAT TGAAAATGTC
TCGGTGAAAA CTGAGAAAGA TAAGGATGTC CGTCCTTATG TGCAGGAAAA AAAGATAGAA
TGGTTTCAGG TTCAGCTTCC TTCCGAAATG GCCGAAATCC GGGGCTATCT GGAAAAAATT
TTTGATGACC GGCTTGTAAC CGTAAGAGAT TTGGGTTTTT CAGTAGGCAG CAGGAAATAT
GTCTCTAAAA AAGACCTCTT GCTTCTCCAG AAGAAACTGC AGGGTGAAAT CCGGATTGGA
GGTGACCCTG CAGTTTTTAC TGCTATGTCT GTACTTGCGG AAATGTTGAA GGTGAATCAC
GCCGTAGAAA TGATTGAGAC TCAGGGGCTT GAGCCCCTCA GGAAGTACCT GGAGAAACTT
GATGCTGAAG CCTCTTCAAA CAGTGCAAGC AAGGCTTCAA AAAGACTGAT GGACGATCTC
TACATGAGAA AAGCCCTTTA CAGAGTAAAG GAATGCGAGG TCGAACATCC AAAACTAGAG
CTTGCACGAA AACTCGTATC CAAACAGCTA AAAGGAAGTC CTGATTCCAG AGTAATTGTT
TTTACGAATT ACAGGGACAC AGCAGAGATA GTGGTAAATG CCCTCTCAGA AATTCCAGAA
ATTGTCCCTA TCCGTTTTGT AGGGCAGGCC TCTCGCCGTA AGGACAAAGG GCTTACGCAA
AAACAACAGG TGGAAGTTCT TGATAAGTTT AGAGCAGGAG AATATAACGT ACTTGTAGCT
ACCTCAGTTG CTGAAGAAGG GCTTGATATC CCTTCAACAG ACCTGGTATT ATTCTACGAA
CCCATTCCCT CGGAAATCCG GAGCATCCAG CGTAAAGGCC GAACAGGCAG ACAGCATAAA
GGTAGAGTCA TTATACTTGT AACAAAGGGT ACACGCGATG AAGCCTATTA CTGGAGCAGT
AAGAGCAAGG AAAAAAGGAT GCTAAATAGT ATGCACGGGC TTGAAGCTCT TCTGGACCCA
AAAGACTCAA AGCAGGGTTT GAAACTTTCA GACTTTGAGT CCAAAGCTTT TATTCCGGCT
GATACACAGA ACGAAGCTGG AAATGAGACT AAAATAAATA ACAGATTCGA AAATGCTAAT
ATAACGCAGG AAAATCAAAA TCCGATGCAG AAAAGCAATG ATCTTGATGT AAATCTCAGT
GGTTTTGTAA ACAGCAGGGG CAAAGCTGTA GATAGTAACG TTTTTGCAGA TAACAAGGAT
GAGGCTGTAG ATAGCAGTAG TTTTGCAGAC ATCGGAGACA GGGCTACAGA TGTTAGATAT
TTAGCTGCAG ACTGTGGGGA TTTAACTGTA GGCAGCAGGG ATATGGGGAC AGGGTCAGAC
TACAACAAGG CGAATGAAGA AATTAACGAA GAGAACTGTG GGGTCGGAAA AGAAGAAGAA
AGAAAGAAGA ATCGGAGTTG GAAAGAAAGC GAAAAAGGAA AAGAACAAAA GAATGAAGAA
AAAAGCAAAG AAGAAAACGT AAAAGAAAGA CAAAAAACTT TTGTCTATTT TGAAACTCTT
TCTGGAAAGA AAACGGAACT CACACCTGAA ACTGCTGCAG AAGTATCCAA AATAGAAACA
AACTCCGAAT CCCCGAAAAT AGTAGTGGAC TTCAGGGAAG CAAAAAGCGG GGTTGCAAAT
GTTCTCGATA AGCTTGGAGT AGAAGTTATT TTTACCACGC TTGAAATTGG TGATTACGTT
GTAAGCGACC GCCTTGCCGT GGAGAGAAAG CGCACGGATG ACTTTGTAAA CTCTCTTGTT
GATGGAAAAC GAAATCTTTT TGCACAATTA TCGGATCTTA CAAGAGTATA TCAAAAGCCT
GTTCTTATTA TTGAAGGAAC AGAACTTTTC ACTTCAAGGC AAATCAACCC TAATGCTATT
TACGGCTCCT TAATATCCAT TGCTATTGAT TTTGGAGTGT CACTATTATA TTCAAGAGAT
GAAGAAGAAA CTGCTGCAAT TTTAAAAATG CTTGCAAAGC GTGAGCAGAT AGGAAATAAA
AGAGAGGTCA ATCCCCACGG GAAAAAGTCA GCAAGTACCC TTCCCGAGCA GCAGGAATAC
CTGGTATCCG CGATCGCAGA CATCGGGCCG AAAGCTGCAA GAAACCTTCT TTTGCACTTT
GGCTCAGTAG AGGCTATTAT GAAAGCTGAT GCCAAAGAAC TCAAGAAAGT AAACTTAATA
GGACCAAAAA GAGCAACAAA AATTAGAGAA CTCATTGAGG CTCCCTATAA AGGATAA
 
Protein sequence
MNENLFSEKP GFMKHPLIKP NTVEQRLYQL NLAGKALEGS SLVVLPTGLG KTIIALFVIV 
SRLQRFGGKA LVLSPTKPLV EQHAAFFKKV MALPEDKILT FTGSIAPAER EKLWAQGELI
VSTPQVIEND LLTKRISLED VTHITFDEAH RAVGNYAYTF IAEKYFESAK NPHVLGITAS
PGSSDEKISE VCQALHIENV SVKTEKDKDV RPYVQEKKIE WFQVQLPSEM AEIRGYLEKI
FDDRLVTVRD LGFSVGSRKY VSKKDLLLLQ KKLQGEIRIG GDPAVFTAMS VLAEMLKVNH
AVEMIETQGL EPLRKYLEKL DAEASSNSAS KASKRLMDDL YMRKALYRVK ECEVEHPKLE
LARKLVSKQL KGSPDSRVIV FTNYRDTAEI VVNALSEIPE IVPIRFVGQA SRRKDKGLTQ
KQQVEVLDKF RAGEYNVLVA TSVAEEGLDI PSTDLVLFYE PIPSEIRSIQ RKGRTGRQHK
GRVIILVTKG TRDEAYYWSS KSKEKRMLNS MHGLEALLDP KDSKQGLKLS DFESKAFIPA
DTQNEAGNET KINNRFENAN ITQENQNPMQ KSNDLDVNLS GFVNSRGKAV DSNVFADNKD
EAVDSSSFAD IGDRATDVRY LAADCGDLTV GSRDMGTGSD YNKANEEINE ENCGVGKEEE
RKKNRSWKES EKGKEQKNEE KSKEENVKER QKTFVYFETL SGKKTELTPE TAAEVSKIET
NSESPKIVVD FREAKSGVAN VLDKLGVEVI FTTLEIGDYV VSDRLAVERK RTDDFVNSLV
DGKRNLFAQL SDLTRVYQKP VLIIEGTELF TSRQINPNAI YGSLISIAID FGVSLLYSRD
EEETAAILKM LAKREQIGNK REVNPHGKKS ASTLPEQQEY LVSAIADIGP KAARNLLLHF
GSVEAIMKAD AKELKKVNLI GPKRATKIRE LIEAPYKG