Gene Mbar_A1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1202 
Symbol 
ID3624549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1486379 
End bp1487401 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content41% 
IMG OID637700092 
Productbeta-lactamase class C and other pencillin-binding proteins 
Protein accessionYP_304749 
Protein GI73668734 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAA ACTACTGGCC AACTATAAAA TGGAAAGCTG TAGATCCGGT AACCTTGAGA 
ATGGATTCTA AAAAGCTTTC AGAGCTTGAA CCTCTGATAA AATCCGAGTA TAGCAATATC
AATGGTATTG TTGTTGTGAA AAATGGAGAT ATTGCTTATG AAAGATACTT TAATGGTTAT
AGCCCGGATG ATACACACCA TGTGGCATCT GTGACGAAAA GCATAATATC TGCTCTTATT
GGTATTGCCA TAGATGCAAG ATATATTAAA AATGTAGACC AGAAGGTGCT GGATTTTTTC
CCTGAGTATG TTCCCGATTC TGCTGATTTA CAGAAACGAG AAATCACCAT ACGCCATCTT
CTCACTATGA CGGCTCCCTA TCCATTTGAG GATTGGCACG AACCGCTGGA CAGGATGTGT
ATGCAATCTG ACTGGGTAAA GTATATTCTG AATATGCTGG GTCAAAAGGG AAGTATTGGA
ACTTTTAAGT ATTCCACTGC AGGGGCGCAC CTGCTTTCAA CTATCATTAC GCGTAGCACA
GGAAAAAGTG CCCGTGAATT TGCCAACGAA CGCTTATTTA GACCCATTGG CATGAAAGAA
ATCCCGGATC ATGAAATGAA AGCGTTTGGG TTTGATGATT TATTCGGGAA AAATGTGAAA
GGATGGGTTA AAGACCCAAA CGGTAACTCT ACAGGAGGAT GGGGACTTAC GCTGACTCCC
CGTGACATGG CACGTTTCGG TTTTCTATAT CTTAACCATG GAATTTGGGA CAATAATCAG
ATTATTTCCG GGACATGGAT TGACGAATCA ACAGCAATGA ACCTCAATAA ATACGGTTAT
CTGTGGTGGT TACGCGAAGA GGATGGAGTT TTTGCGTATT TGGCACTGGG CGACGGCGGT
AATGTTATTT GTTGTATTCC GGAAAAAGAC CTGGTCATAG CAATTGCGTC AGAATTCATT
GTTAATCCTC TTGATAGGTG GAAATTGATT AAAGAATGTA TTATCCCGGC TGTAATGGAC
TAA
 
Protein sequence
MQRNYWPTIK WKAVDPVTLR MDSKKLSELE PLIKSEYSNI NGIVVVKNGD IAYERYFNGY 
SPDDTHHVAS VTKSIISALI GIAIDARYIK NVDQKVLDFF PEYVPDSADL QKREITIRHL
LTMTAPYPFE DWHEPLDRMC MQSDWVKYIL NMLGQKGSIG TFKYSTAGAH LLSTIITRST
GKSAREFANE RLFRPIGMKE IPDHEMKAFG FDDLFGKNVK GWVKDPNGNS TGGWGLTLTP
RDMARFGFLY LNHGIWDNNQ IISGTWIDES TAMNLNKYGY LWWLREEDGV FAYLALGDGG
NVICCIPEKD LVIAIASEFI VNPLDRWKLI KECIIPAVMD